RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 RAB18Q9NP72 206 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 ACSS1Q9NUB1 689 aaPredicted RBP4.92□□□□□ -1.62
VPS41-209ENST00000457055 MIOXQ9UGB7 285 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 DKKL1Q9UK85 242 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 MRTO4Q9UKD2 239 aaKnown RBP4.92□□□□□ -1.62
VPS41-209ENST00000457055 EMCNQ9ULC0 261 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 ZNF490Q9ULM2 529 aaPredicted RBP4.92□□□□□ -1.62
VPS41-209ENST00000457055 RAB26Q9ULW5 256 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 PRPF19Q9UMS4 504 aaKnown RBP4.92□□□□□ -1.62
VPS41-209ENST00000457055 A4GNTQ9UNA3 340 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 NPIPA1Q9UND3 350 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 MEMO1Q9Y316 297 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 YIPF1Q9Y548 306 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 OR51B4Q9Y5P0 310 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 EYSQ5T1H1 3165 aa4.92□□□□□ -1.62
VPS41-209ENST00000457055 TCF20Q9UGU0 1960 aaKnown RBP4.92□□□□□ -1.62
VPS41-209ENST00000457055 ALPK3Q96L96 1907 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 GJE1A6NN92 205 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ZNF99A8MXY4 864 aaPredicted RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 TRDCB7Z8K6 153 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 KLRF2D3W0D1 207 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 G3V3Y1 287 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 H0Y980 276 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 H0YIG0 161 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 K7EP13 123 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 IMPA2O14732 288 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 SIVA1O15304 175 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 KLRC4O43908 158 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 GLSO94925 669 aaPredicted RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 NKX2-2O95096 273 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 TNFAIP8O95379 198 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 CPNE6O95741 557 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 C2P06681 752 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 NR2F6P10588 404 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 EGR2P11161 476 aaPredicted RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 B4GALT1P15291 398 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 DRD4P21917 467 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 GNRHRP30968 328 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 SSTR5P35346 364 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 CEACAM6P40199 344 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 MATKP42679 507 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 IER3P46695 156 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 SLC6A9P48067 706 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 PTH2RP49190 550 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 PPOXP50336 477 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 XKP51811 444 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ZNF75DP51815 510 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 RAB2AP61019 212 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 UBE2KP61086 200 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 DYNLL1P63167 89 aaKnown RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 GRB7Q14451 532 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 KRT33BQ14525 404 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 MPPED2Q15777 294 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 TNXAQ16473 311 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 MEP1AQ16819 746 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 RNASE10Q5GAN6 216 aaKnown RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 C9orf64Q5T6V5 341 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 N4BP2L1Q5TBK1 243 aaPredicted RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 FAM69BQ5VUD6 431 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 DHRS4L2Q6PKH6 230 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 SPNS3Q6ZMD2 512 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 DCDC5Q6ZRR9 648 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 TMEM179Q6ZVK1 233 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 IGFN1Q86VF2 1251 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 THOC6Q86W42 341 aaKnown RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 MFSD6LQ8IWD5 586 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ZBTB8OSQ8IWT0 167 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ZDHHC23Q8IYP9 409 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 TMEM123Q8N131 208 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 SVOPLQ8N434 492 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 SLC44A3Q8N4M1 653 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 TMEM251Q8N6I4 163 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 CSNK1A1LQ8N752 337 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 C11orf44Q8N8P7 122 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 OR7G2Q8NG99 324 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 OR5L1Q8NGL2 311 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 OR5H6Q8NGV6 325 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 PIK3R3Q92569 461 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ATOH1Q92858 354 aaPredicted RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 PINX1Q96BK5 328 aaKnown RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 PABPC5Q96DU9 382 aaKnown RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 OTUB1Q96FW1 271 aaPredicted RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 SFRP2Q96HF1 295 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 IGSF21Q96ID5 467 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 RNF170Q96K19 258 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 NOL4LQ96MY1 436 aaPredicted RBP4.91□□□□□ -1.62
VPS41-209ENST00000457055 OR5M11Q96RB7 305 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 PHB2Q99623 299 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ATG101Q9BSB4 218 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 MED18Q9BUE0 208 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 PDCD10Q9BUL8 212 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 GGACTQ9BVM4 153 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ACTR6Q9GZN1 396 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ZDHHC6Q9H6R6 413 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 HMG20AQ9NP66 347 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 NIT2Q9NQR4 276 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 ASAH2Q9NR71 780 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 OLFML3Q9NRN5 406 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 SEMA4GQ9NTN9 838 aa4.91□□□□□ -1.62
VPS41-209ENST00000457055 FGFR1OP2Q9NVK5 253 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms