RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 LRRN1Q6UXK5 716 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 ZNF782Q6ZMW2 699 aaPredicted RBP10.3□□□□□ -0.76
DDR1-240ENST00000454612 ZNF620Q6ZNG0 422 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 ZNF248Q8NDW4 579 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 TCEAL3Q969E4 200 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 DERL3Q96Q80 235 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 POLMQ9NP87 494 aaPredicted RBP10.3□□□□□ -0.76
DDR1-240ENST00000454612 B3GAT2Q9NPZ5 323 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 ACOXLQ9NUZ1 547 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 RCE1Q9Y256 329 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 SZT2Q5T011 3432 aa10.3□□□□□ -0.76
DDR1-240ENST00000454612 UBE2QL1A1L167 161 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 B4DXG7 233 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 C5orf67F2Z3F1 127 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 IL1AP01583 271 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 LINC00271P0C7V0 271 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 PRKXP51817 358 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 GMFBP60983 142 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 NKPD1Q17RQ9 610 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 C1orf94Q6P1W5 598 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 GID4Q8IVV7 300 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.29□□□□□ -0.76
DDR1-240ENST00000454612 ST6GAL2Q96JF0 529 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 TIMM29Q9BSF4 260 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 SCN8AQ9UQD0 1980 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 SIX6O95475 246 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 DGCR2P98153 550 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 EEF1A2Q05639 463 aaKnown RBP10.29□□□□□ -0.76
DDR1-240ENST00000454612 VWA2Q5GFL6 755 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 FAM180AQ6UWF9 173 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 NDUFAF7Q7L592 441 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 CAMKMTQ7Z624 323 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 CCDC190Q86UF4 302 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 ATCAYQ86WG3 371 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 MOSPD2Q8NHP6 518 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 CASTOR1Q8WTX7 329 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 ZNF768Q9H5H4 540 aaKnown RBP10.29□□□□□ -0.76
DDR1-240ENST00000454612 KIR3DX1Q9H7L2 352 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 FZD7O75084 574 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 TBXA2RP21731 343 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 GABRA5P31644 462 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 LPAL2Q16609 132 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 TMEM69Q5SWH9 247 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 LRRC56Q8IYG6 542 aaPredicted RBP10.29□□□□□ -0.76
DDR1-240ENST00000454612 PM20D2Q8IYS1 436 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 NPRL2Q8WTW4 380 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 FBLIM1Q8WUP2 373 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 DVL3Q92997 716 aaPredicted RBP10.29□□□□□ -0.76
DDR1-240ENST00000454612 SEC22CQ9BRL7 303 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 SRRQ9GZT4 340 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 PRDM9Q9NQV7 894 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 NDUFB11Q9NX14 153 aa10.29□□□□□ -0.76
DDR1-240ENST00000454612 PRICKLE3O43900 615 aaPredicted RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 AGR2O95994 175 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 GLAP06280 429 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 EIF4EP06730 217 aaKnown RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 CBR1P16152 277 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 PEBP1P30086 187 aaKnown RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 NUDT1P36639 197 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 MAP3K8P41279 467 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 PITPNBP48739 271 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 ALKBH2Q6NS38 261 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 CREB3L2Q70SY1 520 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 KRT77Q7Z794 578 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 LGALS14Q8TCE9 139 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 CNN2Q99439 309 aaKnown RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 ARL6Q9H0F7 186 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 SYT4Q9H2B2 425 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 NOX4Q9NPH5 578 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 NIT2Q9NQR4 276 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 B3GNT2Q9NY97 397 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 KDM4EB2RXH2 506 aaPredicted RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 ARPC1BO15143 372 aaKnown RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 PPM1BO75688 479 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 ARL6IP5O75915 188 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 NDUFB2O95178 105 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 DNASE1L1P49184 302 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 C3orf38Q5JPI3 329 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 OR7E24Q6IFN5 339 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 SFXN4Q6P4A7 337 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 LRRC69Q6ZNQ3 347 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 SLC35F2Q8IXU6 374 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 CCDC36Q8IYA8 594 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 RCBTB1Q8NDN9 531 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 OR4D9Q8NGE8 314 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 RBPMSQ93062 196 aaKnown RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 GPER1Q99527 375 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 MNTQ99583 582 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 MAN2C1Q9NTJ4 1040 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 GMEB2Q9UKD1 530 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 SIRT4Q9Y6E7 314 aaPredicted RBP10.28□□□□□ -0.76
DDR1-240ENST00000454612 TRAV18A0A075B6X5 111 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 EPOPA6NHQ4 379 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 SEMG1P04279 462 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 CBX5P45973 191 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 FUT5Q11128 374 aa10.28□□□□□ -0.76
DDR1-240ENST00000454612 RFLNBQ8N5W9 214 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms