RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 POFUT2Q9Y2G5 429 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 PCDHGB7Q9Y5F8 929 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 DOCK7Q96N67 2140 aa9.86□□□□□ -0.83
SCN9A-205ENST00000454569 COL6A6A6NMZ7 2263 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 LIPT2A6NK58 231 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 NPIPA5E9PKD4 350 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 MS4A18H0YCH9 400 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 TNFSF11O14788 317 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 SEC14L5O43304 696 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 SAGP10523 405 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF17P17021 662 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 AQP2P41181 271 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 LHX2P50458 406 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 CRISP1P54107 249 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 RAC1P63000 192 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 LY6DQ14210 128 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 PTGES3Q15185 160 aaKnown RBP9.85□□□□□ -0.83
SCN9A-205ENST00000454569 MS4A18Q3C1V0 323 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 PRR30Q53SZ7 412 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-205ENST00000454569 CLEC12AQ5QGZ9 265 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF620Q6ZNG0 422 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 RASSF6Q6ZTQ3 369 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 OAFQ86UD1 273 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 PARP8Q8N3A8 854 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 MARVELD2Q8N4S9 558 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 DHRSXQ8N5I4 330 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 LRRC75AQ8NAA5 344 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 CYGBQ8WWM9 190 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 LIPHQ8WWY8 451 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 DDIT4LQ96D03 193 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 ADGRG7Q96K78 797 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 RDH12Q96NR8 316 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 NR1H4Q96RI1 486 aaPredicted RBP9.85□□□□□ -0.83
SCN9A-205ENST00000454569 GABARAPL3Q9BY60 117 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 SRXN1Q9BYN0 137 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 POTEKPQ9BYX7 375 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 OR52D1Q9H346 318 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF556Q9HAH1 456 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 HHATLQ9HCP6 504 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 ACKR4Q9NPB9 350 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 SERINC1Q9NRX5 453 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 B4GALT7Q9UBV7 327 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 NPIPA1Q9UND3 350 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 IGSF10Q6WRI0 2623 aa9.85□□□□□ -0.83
SCN9A-205ENST00000454569 IGHV3-15A0A0B4J1V0 119 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 KDM4EB2RXH2 506 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-205ENST00000454569 MCIDASD6RGH6 385 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 BLOC1S5-TXNDC5H3BN57 136 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 M0R082 166 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 TFECO14948 347 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-205ENST00000454569 AKR7A3O95154 331 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 AHSA1O95433 338 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 F13BP05160 661 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 TSPAN19P0C672 248 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 HLA-DOBP13765 273 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF24P17028 368 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ELK4P28324 431 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 IDUAP35475 653 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 DIO1P49895 249 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 P2RY4P51582 365 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 RAD23AP54725 363 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 MLLT10P55197 1068 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 CLDN18P56856 261 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 RPS4XP62701 263 aaKnown RBP9.84□□□□□ -0.83
SCN9A-205ENST00000454569 CDK5Q00535 292 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 SRYQ05066 204 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 PDK3Q15120 406 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 RFX4Q33E94 735 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ZBED5Q49AG3 693 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 FAM69AQ5T7M9 428 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 RPUSD3Q6P087 351 aaKnown RBP9.84□□□□□ -0.83
SCN9A-205ENST00000454569 FGD2Q7Z6J4 655 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 CCDC103Q8IW40 242 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 CHERPQ8IWX8 916 aaKnown RBP9.84□□□□□ -0.83
SCN9A-205ENST00000454569 CDK20Q8IZL9 346 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 TMEM99Q8N816 258 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF555Q8NEP9 628 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 MFSD8Q8NHS3 518 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 NEIL3Q8TAT5 605 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF417Q8TAU3 575 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF845Q96IR2 970 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-205ENST00000454569 MUS81Q96NY9 551 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ZNF587Q96SQ5 575 aaPredicted RBP9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ANKRD60Q9BZ19 345 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 NANSQ9NR45 359 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 QPCTLQ9NXS2 382 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 IL20Q9NYY1 176 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 UBAP1Q9NZ09 502 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 TMEM5Q9Y2B1 443 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 TRGV5A0A0B4J1U4 118 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 LOC100130705A0A1B0GUX0 176 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 ZAR1LA6NP61 321 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 C11orf98E9PRG8 122 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 H3BN98 237 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 EIF1AYO14602 144 aaKnown RBP9.84□□□□□ -0.83
SCN9A-205ENST00000454569 IMPA2O14732 288 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 SLC16A6O15403 523 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 CXCL13O43927 109 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 SLC2A10O95528 541 aa9.84□□□□□ -0.83
SCN9A-205ENST00000454569 IGF2P01344 180 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms