RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SAMD8Q96LT4 415 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 ZNF570Q96NI8 536 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 MCCC2Q9HCC0 563 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
TNF-208ENST00000449264 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 ZNHIT1O43257 154 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 AKR7A3O95154 331 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 PMS2P2O95744 297 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 ACTL6AO96019 429 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 ZNF708P17019 499 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 AQP2P41181 271 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 CRISP1P54107 249 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 CLDN18P56856 261 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 FXYD6P3P58550 94 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 ESRRGP62508 458 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 KLRB1Q12918 225 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 PMS2P3Q13401 168 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 MFSD13AQ14CX5 517 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 TAF11Q15544 211 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 NHSL2Q5HYW2 709 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 TMEM236Q5W0B7 351 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 VASNQ6EMK4 673 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 SMARCD3Q6STE5 483 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 THSD4Q6ZMP0 1018 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 IGFN1Q86VF2 1251 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 MEIOBQ8N635 442 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 OR52L1Q8NGH7 329 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 OR5J2Q8NH18 312 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 OR6S1Q8NH40 331 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 OR10D3Q8NH80 312 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 OR2V1Q8NHB1 315 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 MOSPD2Q8NHP6 518 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 CORINQ9Y5Q5 1042 aa13.13□□□□□ -0.31
TNF-208ENST00000449264 IGHV3-15A0A0B4J1V0 119 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 C11orf98E9PRG8 122 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 BCKDKO14874 412 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 CXCL13O43927 109 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 SERPINI2O75830 405 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 NDUFB2O95178 105 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 RCBTB2O95199 551 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 OR6A2O95222 327 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 CLIC3O95833 236 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 ADORA3P0DMS8 318 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 KLK2P20151 261 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 AHCYP23526 432 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 RPL4P36578 427 aaKnown RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 CLDN15P56746 228 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 RPS4XP62701 263 aaKnown RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 CSNK2A1P68400 391 aaPredicted RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 SLC35A1P78382 337 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 RPL18Q07020 188 aaKnown RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 FHL1Q13642 323 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 PTGES3Q15185 160 aaKnown RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 SGCBQ16585 318 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 PRR30Q53SZ7 412 aaPredicted RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 WLSQ5T9L3 541 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 RPL13AP3Q6NVV1 102 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 OSTF1Q92882 214 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 TSSK6Q9BXA6 273 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 SRXN1Q9BYN0 137 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 GRIP2Q9C0E4 1043 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 CHST11Q9NPF2 352 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 FAM118AQ9NWS6 357 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 CAMK2AQ9UQM7 478 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 TRAPPC4Q9Y296 219 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 HIF3AQ9Y2N7 669 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 RP1L1Q8IWN7 2480 aaPredicted RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 MCIDASD6RGH6 385 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 PTP4A3O75365 173 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 SFTPCP11686 197 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 UQCRC1P31930 480 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 CAPGP40121 348 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 CARD18P57730 90 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 PRPS1P60891 318 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 ALG10Q5BKT4 473 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 PDSS1Q5T2R2 415 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 CLDN22Q8N7P3 220 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 TMEM99Q8N816 258 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 SCAIQ8N9R8 606 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 ZNF845Q96IR2 970 aaPredicted RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 ADGRG7Q96K78 797 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 TIMP4Q99727 224 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 IFT27Q9BW83 186 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 ENKD1Q9H0I2 346 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 MRPL39Q9NYK5 338 aaKnown RBP13.12□□□□□ -0.31
TNF-208ENST00000449264 IL20Q9NYY1 176 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 GMPPBQ9Y5P6 360 aa13.12□□□□□ -0.31
TNF-208ENST00000449264 A0A1B0GTH9 108 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 LOC100130705A0A1B0GUX0 176 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 NPIPA2E9PIF3 369 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 NPIPA3F8WFD2 350 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 PLPP3O14495 311 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 AQP7O14520 342 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 RNF13O43567 381 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 PPP1R3DO95685 299 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 PLGP00747 810 aaPredicted RBP13.11□□□□□ -0.31
TNF-208ENST00000449264 F13BP05160 661 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 GNAO1P09471 354 aa13.11□□□□□ -0.31
TNF-208ENST00000449264 SLC6A6P31641 620 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms