RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 EPHA3P29320 983 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 CRATP43155 626 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 MVDP53602 400 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 UBE2NP61088 152 aaKnown RBP13.52□□□□□ -0.25
TRA2A-203ENST00000448549 TUBA1BP68363 451 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 TUBA4AP68366 448 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 SRSF2Q01130 221 aaKnown RBP13.52□□□□□ -0.25
TRA2A-203ENST00000448549 LIN52Q52LA3 116 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 C1orf140Q5VVS0 124 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 PRAMEF8Q5VWM4 474 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 PRAMEF7Q5VXH5 474 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 FAM166AQ6J272 317 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 WDR93Q6P2C0 686 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 NIPAL3Q6P499 406 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 ANKRD16Q6P6B7 361 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 VHLLQ6RSH7 139 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 IL17RELQ6ZVW7 336 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 TUBA1AQ71U36 451 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 LINGO2Q7L985 606 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 EPHX4Q8IUS5 362 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 CLIP4Q8N3C7 705 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 SLC38A5Q8WUX1 472 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 BCL2L2Q92843 193 aaPredicted RBP13.52□□□□□ -0.25
TRA2A-203ENST00000448549 MSI2Q96DH6 328 aaKnown RBP13.52□□□□□ -0.25
TRA2A-203ENST00000448549 PAIP2Q9BPZ3 127 aaKnown RBP13.52□□□□□ -0.25
TRA2A-203ENST00000448549 KATNB1Q9BVA0 655 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 CENPHQ9H3R5 247 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 P2RX2Q9UBL9 471 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 KCNS2Q9ULS6 477 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 ZNF443Q9Y2A4 671 aaPredicted RBP13.52□□□□□ -0.25
TRA2A-203ENST00000448549 DSPPQ9NZW4 1301 aa13.52□□□□□ -0.25
TRA2A-203ENST00000448549 IGHV4-61A0A0C4DH41 118 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 LOC390937A0A1W2PQ73 354 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 B9A039 149 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 FRS3O43559 492 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 BCHEP06276 602 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 TFPTP0C1Z6 253 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 OR4A8P0C604 315 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 APEHP13798 732 aaKnown RBP13.51□□□□□ -0.25
TRA2A-203ENST00000448549 SRD5A1P18405 259 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 NAAAQ02083 359 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 ADIPOQQ15848 244 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 RPS26P11Q5JNZ5 115 aaPredicted RBP13.51□□□□□ -0.25
TRA2A-203ENST00000448549 FAM120AOSQ5T036 256 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 KDM8Q8N371 416 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 MREGQ8N565 214 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 GLB1L3Q8NCI6 653 aaPredicted RBP13.51□□□□□ -0.25
TRA2A-203ENST00000448549 CALML5Q9NZT1 146 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.51□□□□□ -0.257e-6■■□□□ 11.8
TRA2A-203ENST00000448549 PRDM4Q9UKN5 801 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 RASD1Q9Y272 281 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 CHST2Q9Y4C5 530 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 V9GYY5 206 aaPredicted RBP13.51□□□□□ -0.25
TRA2A-203ENST00000448549 PLCE1Q9P212 2302 aa13.51□□□□□ -0.25
TRA2A-203ENST00000448549 ARPC4-TTLL3A0A0A6YYG9 625 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 NPIPB7O75200 414 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 CECR9P0C854 216 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 THBS2P35442 1172 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 CRISP3P54108 245 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 DSTNP60981 165 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 LARS2Q15031 903 aaKnown RBP13.5□□□□□ -0.25
TRA2A-203ENST00000448549 IQCCQ4KMZ1 466 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 RNF220Q5VTB9 566 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 ATG16L1Q676U5 607 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 SERPINA11Q86U17 422 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 SLC25A36Q96CQ1 311 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 SEC61A2Q9H9S3 476 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 TPT1P8Q9HAU6 139 aa13.5□□□□□ -0.25
TRA2A-203ENST00000448549 CRNNQ9UBG3 495 aaPredicted RBP13.5□□□□□ -0.25
TRA2A-203ENST00000448549 A0A096LPI6 279 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 OR6C65A6NJZ3 312 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 TMEM229AB2RXF0 380 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 FTCDNL1E5RQL4 147 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 HDAC3O15379 428 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 SLC22A3O75751 556 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 AHSA1O95433 338 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 ANP32DO95626 131 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 TGFAP01135 160 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 IL6P05231 212 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 KITP10721 976 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 PNMTP11086 282 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 PAX7P23759 505 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 CALCRP30988 508 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 HOXC5Q00444 222 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 ROR2Q01974 943 aaKnown RBP13.49□□□□□ -0.25
TRA2A-203ENST00000448549 EFNB3Q15768 340 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 GTDC1Q4AE62 458 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 TNFAIP8L3Q5GJ75 292 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 CEP85LQ5SZL2 805 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 HHATQ5VTY9 493 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 NXNQ6DKJ4 435 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 ANKRD42Q8N9B4 389 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 MAGEE2Q8TD90 523 aaPredicted RBP13.49□□□□□ -0.25
TRA2A-203ENST00000448549 STK35Q8TDR2 534 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 TMEM19Q96HH6 336 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 ZNF317Q96PQ6 595 aaPredicted RBP13.49□□□□□ -0.25
TRA2A-203ENST00000448549 C19orf24Q9BVV8 132 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 SPATA9Q9BWV2 254 aa13.49□□□□□ -0.25
TRA2A-203ENST00000448549 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms