RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 NEUROG2Q9H2A3 272 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CENPHQ9H3R5 247 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ST6GALNAC4Q9H4F1 302 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 DCTPP1Q9H773 170 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 COPS7BQ9H9Q2 264 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 TUFT1Q9NNX1 390 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF302Q9NR11 478 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 COMMD8Q9NX08 183 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 SLCO1C1Q9NYB5 712 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 C6orf203Q9P0P8 240 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 APOBEC3BQ9UH17 382 aaKnown RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 TBK1Q9UHD2 729 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 APPL1Q9UKG1 709 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 NPIPA1Q9UND3 350 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 FARSAQ9Y285 508 aaKnown RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 HES2Q9Y543 173 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CPAMD8Q8IZJ3 1885 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 TRAV17A0A0B4J275 112 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 IGHV3-35A0A0C4DH35 117 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 C13orf42A0A1B0GVH6 325 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 GABRR3A8MPY1 467 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 FCGR3BO75015 233 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ALOX12BO75342 701 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 SEC22BO75396 215 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 PNPP00491 289 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 OR4Q2P0C623 313 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 FAM58BPP0C7Q3 252 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 C8orf89P0DMQ9 161 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 DLATP10515 647 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 CPN1P15169 458 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 PRTN3P24158 256 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 TMOD1P28289 359 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 OTX2P32243 289 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 NUDT1P36639 197 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANP32AP39687 249 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ID1P41134 155 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 FRKP42685 505 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 NPBWR1P48145 328 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 SNU13P55769 128 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 HSD17B7P56937 341 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 RPS4XP62701 263 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 RPP38P78345 283 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 IL1RL1Q01638 556 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 CETN1Q12798 172 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 TRADDQ15628 312 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 PPP1R3AQ16821 1122 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANKRD20A4Q4UJ75 823 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF658BQ4V348 819 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANKRD20A8PQ5CZ79 823 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANKRD20A2Q5SQ80 823 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANKRD20A1Q5TYW2 823 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANKRD20A3Q5VUR7 823 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF776Q68DI1 518 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 RAB12Q6IQ22 244 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 CAVIN1Q6NZI2 390 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 Q6P435 159 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 IYDQ6PHW0 289 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 LINC00696Q6ZRV3 163 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 PIWIL3Q7Z3Z3 882 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 SIX6OS1Q8N1H7 587 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 C10orf53Q8N6V4 93 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 TMEM99Q8N816 258 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 SYT14Q8NB59 555 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF540Q8NDQ6 660 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANKRD20A12PQ8NF67 263 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 OR4D9Q8NGE8 314 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 FIBINQ8TAL6 211 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 VN1R17PQ8TDU5 208 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 N4BP2L2Q92802 583 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 CORO2AQ92828 525 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 MR1Q95460 341 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 TADA1Q96BN2 335 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 PIK3IP1Q96FE7 263 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ELMO2Q96JJ3 720 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 CABS1Q96KC9 395 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ATG101Q9BSB4 218 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 DESI2Q9BSY9 194 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 SPXQ9BT56 116 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 FUT8Q9BYC5 575 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 VIPAS39Q9H9C1 493 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ISG20L2Q9H9L3 353 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 EDA2RQ9HAV5 297 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 RAB9BQ9NP90 201 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 GPR173Q9NS66 373 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ABCB8Q9NUT2 735 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 MED17Q9NVC6 651 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF319Q9P2F9 582 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ARMCX3Q9UH62 379 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 MOSPD1Q9UJG1 213 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 NOCTQ9UK39 431 aaKnown RBP1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 RABL2BQ9UNT1 228 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 ITM2BQ9Y287 266 aa1.76□□□□□ -2.13
HMGB1P18-201ENST00000438801 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
HMGB1P18-201ENST00000438801 A0A0U1RQK1 487 aa1.75□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF320A2RRD8 509 aa1.75□□□□□ -2.13
HMGB1P18-201ENST00000438801 TMEM110-MUSTN1A8MSY1 372 aa1.75□□□□□ -2.13
HMGB1P18-201ENST00000438801 SLC31A1O15431 190 aa1.75□□□□□ -2.13
HMGB1P18-201ENST00000438801 GPAA1O43292 621 aa1.75□□□□□ -2.13
HMGB1P18-201ENST00000438801 CACNG3O60359 315 aa1.75□□□□□ -2.13
HMGB1P18-201ENST00000438801 CLN5O75503 358 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms