RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 REP15Q6BDI9 236 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 AAED1Q7RTV5 226 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ZBED8Q8IZ13 594 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 POMGNT2Q8NAT1 580 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CDS1Q92903 461 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ARL8AQ96BM9 186 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 WWC2-AS2Q96NR7 200 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ALKBH3Q96Q83 286 aaPredicted RBP10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SHCBP1LQ9BZQ2 653 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CTPS2Q9NRF8 586 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 PURGQ9UJV8 347 aaKnown RBP10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SACSQ9NZJ4 4579 aa10.42□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 FAM159BA6NKW6 160 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 E7ESA3 106 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 H3BNH8 94 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ZNF264O43296 627 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 KRT33AO76009 404 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CLPXO76031 633 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 C2P06681 752 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CSF1P09603 554 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CCNA2P20248 432 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 MTNR1AP48039 350 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 PROK1P58294 105 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CCL8P80075 99 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 HNRNPA0Q13151 305 aaKnown RBP10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 FAM83EQ2M2I3 478 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 LCE2CQ5TA81 110 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 GRTP1Q5TC63 336 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ANKRD26P1Q6NSI1 321 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ADGRG3Q86Y34 549 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 LINC01006Q8NI28 216 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 MAGEE2Q8TD90 523 aaPredicted RBP10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CDKL2Q92772 493 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CIDECQ96AQ7 238 aaPredicted RBP10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 TMEM45BQ96B21 275 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 OSBPL9Q96SU4 736 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 NAPGQ99747 312 aaPredicted RBP10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 BTBD2Q9BX70 525 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CHIAQ9BZP6 476 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 MARCH7Q9H992 704 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ASH2LQ9UBL3 628 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SNX12Q9UMY4 172 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 DTNAQ9Y4J8 743 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 KCNE3Q9Y6H6 103 aa10.41□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 TCRBV9S1A1TA0A576 114 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 C5orf63A6NC05 138 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 NPIPB9F8W1W9 429 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 DNPH1O43598 174 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 EIF4E2O60573 245 aaKnown RBP10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 UPK3AO75631 287 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 OTCP00480 354 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 IFI6P09912 130 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 UBL4AP11441 157 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 BCKDHAP12694 445 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 PAX7P23759 505 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SELENOPP49908 381 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ATP12AP54707 1039 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ZNF763Q0D2J5 394 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SKP2Q13309 424 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 C2orf68Q2NKX9 166 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SPIN4Q56A73 249 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 TECRLQ5HYJ1 363 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 FOXB2Q5VYV0 432 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 MDP1Q86V88 176 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CTAGE3PQ8IX95 158 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SLC25A43Q8WUT9 341 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ST8SIA1Q92185 356 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CHMP6Q96FZ7 201 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 PBKQ96KB5 322 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 C16orf45Q96MC5 204 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 MS4A4EQ96PG1 132 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 GAL3ST1Q99999 423 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CCDC106Q9BWC9 280 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ZNF385DQ9H6B1 395 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SLC6A13Q9NSD5 602 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 ACER3Q9NUN7 267 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 UBAP1Q9NZ09 502 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 SEC14L4Q9UDX3 406 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 CHRNA9Q9UGM1 479 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 DUSP13Q9UII6 198 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 HDGFL3Q9Y3E1 203 aa10.4□□□□□ -0.74
SMAD9-IT1-201ENST00000437983 PPIAL4EA0A075B759 164 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PPIAL4CA0A0B4J2A2 164 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 IGHV1-69-2A0A0G2JMI3 117 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 CENPVL1A0A0U1RR11 272 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ANKRD34BA5PLL1 514 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 ZNF587BE7ETH6 402 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PPIAL4DF5H284 164 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 H0YL77 283 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 STX16-NPEPL1H3BU86 382 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 STX16O14662 325 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 FRS3O43559 492 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 TRAF3IP2O43734 574 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 RSL1D1O76021 490 aaKnown RBP10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 KLHL2O95198 593 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 OPN1MWP04001 364 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 RPS17P08708 135 aaKnown RBP10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 PPIAL4FP0DN26 164 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 OPN1MW2P0DN77 364 aa10.39□□□□□ -0.75
SMAD9-IT1-201ENST00000437983 OPN1MW3P0DN78 364 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms