RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MROH6A6NGR9 719 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 RETP07949 1114 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 EIF1P41567 113 aaKnown RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 HLCSP50747 726 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 SHHQ15465 462 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 OR1Q1Q15612 314 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 EXT1Q16394 746 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 RPE65Q16518 533 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 GAREM2Q75VX8 874 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 GPR26Q8NDV2 337 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 OR7D2Q96RA2 312 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 SMIM3Q9BZL3 60 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 C1orf198Q9H425 327 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 TRAV27A0A087WT01 109 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 TNFRSF1BP20333 461 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 PRDX3P30048 256 aaKnown RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 MMP12P39900 470 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 RAB40BQ12829 278 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CAMK2BQ13554 666 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 SMAD2Q15796 467 aaKnown RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 ACSM3Q53FZ2 586 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 ATPAF1Q5TC12 328 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 COX15Q7KZN9 410 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 FAM217AQ8IXS0 508 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 SLC35G3Q8N808 338 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 OR9Q2Q8NGE9 314 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 BRIX1Q8TDN6 353 aaKnown RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 INTS12Q96CB8 462 aaKnown RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 ACKR4Q9NPB9 350 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 GPATCH2Q9NW75 528 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 PAQR5Q9NXK6 330 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 KIAA1456Q9P272 454 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 DNAJC15Q9Y5T4 150 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 MEIS3P1A6NDR6 274 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 METTL15A6NJ78 407 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 APOA2P02652 100 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 OR10J4P0C629 311 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 UBCP0CG48 685 aaKnown RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 ITGB8P26012 769 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CSNK1DP48730 415 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CYB561P49447 251 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 HBG1P69891 147 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 HBG2P69892 147 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 VEZF1Q14119 521 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 ERV3-1Q14264 604 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 GALEQ14376 348 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 HNF4GQ14541 408 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 ZMAT1Q5H9K5 638 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 SLC22A25Q6T423 547 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 METAP1DQ6UB28 335 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CYS1Q717R9 158 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 MEPCEQ7L2J0 689 aaKnown RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 NDUFAF7Q7L592 441 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 ANKRD33Q7Z3H0 272 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 SLC35F3Q8IY50 421 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 NXPE3Q969Y0 559 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 TPPP3Q9BW30 176 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 OR51E2Q9H255 320 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 LUZP4Q9P127 313 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CCL26Q9Y258 94 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 ZCWPW2A0A1B0GU75 182 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 M0QZ24 198 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CDK4P11802 303 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 BMP1P13497 986 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 HLA-DOBP13765 273 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 HIST1H1TP22492 207 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 PAX6P26367 422 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 HOXD11P31277 338 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 SUB1P53999 127 aaKnown RBP eCLIP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CXADRP78310 365 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 MFGE8Q08431 387 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CPZQ66K79 652 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 LCN8Q6JVE9 175 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 CCBE1Q6UXH8 406 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-208ENST00000428599 GDPGP1Q6ZNW5 385 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 OVCH1Q7RTY7 1134 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 PNPLA1Q8N8W4 532 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 OR7G1Q8NGA0 311 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 GPR150Q8NGU9 434 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 KCNE4Q8WWG9 221 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 OBP2AQ9NY56 170 aa8.32□□□□□ -1.08
CTNND1-208ENST00000428599 AGPAT2O15120 278 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 FRS3O43559 492 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 MRPS14O60783 128 aaKnown RBP8.31□□□□□ -1.08
CTNND1-208ENST00000428599 SH3BP2P78314 561 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 MFAP5Q13361 173 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 ENTPD8Q5MY95 495 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 RTN4RL1Q86UN2 441 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-208ENST00000428599 ACOT11Q8WXI4 607 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-208ENST00000428599 MRPL38Q96DV4 380 aaKnown RBP8.31□□□□□ -1.08
CTNND1-208ENST00000428599 FUNDC2Q9BWH2 189 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 SORBS1Q9BX66 1292 aaKnown RBP8.31□□□□□ -1.08
CTNND1-208ENST00000428599 OR52D1Q9H346 318 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 TEX51A0A1B0GUA7 166 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-208ENST00000428599 AGAP14A8MT82 685 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 DVL1O14640 695 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 ARPC1BO15143 372 aaKnown RBP8.31□□□□□ -1.08
CTNND1-208ENST00000428599 ARAFP10398 606 aa8.31□□□□□ -1.08
CTNND1-208ENST00000428599 HSD17B1P14061 328 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms