RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ROS1P08922 2347 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 FAM220BPB1ANY3 271 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 LRRN3E7EW58 273 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 M0R082 166 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 SNX3O60493 162 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 CCDC22O60826 627 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 SHOX2O60902 331 aaPredicted RBP12.02□□□□□ -0.49
SNX3-204ENST00000426155 MRPL33O75394 65 aaKnown RBP12.02□□□□□ -0.49
SNX3-204ENST00000426155 RAD51DO75771 328 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 GOSR1O95249 250 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 PLAUP00749 431 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 NPPAP01160 153 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 PPP3CBP16298 524 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 ART1P52961 327 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 FAPQ12884 760 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 P2RY6Q15077 328 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 LRRC23Q53EV4 343 aaPredicted RBP12.02□□□□□ -0.49
SNX3-204ENST00000426155 ENTPD8Q5MY95 495 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 INTS11Q5TA45 600 aaKnown RBP12.02□□□□□ -0.49
SNX3-204ENST00000426155 TSPO2Q5TGU0 170 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 FBXW9Q5XUX1 488 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 WDR88Q6ZMY6 472 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 CCDC80Q76M96 950 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 C10orf67Q8IYJ2 551 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 STEAP2Q8NFT2 490 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 MFSD8Q8NHS3 518 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 ZNF417Q8TAU3 575 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 SLC26A7Q8TE54 656 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 DNAJA4Q8WW22 397 aaPredicted RBP12.02□□□□□ -0.49
SNX3-204ENST00000426155 SLC38A4Q969I6 547 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 SLC47A1Q96FL8 570 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 PLPPR2Q96GM1 343 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 ZNF587Q96SQ5 575 aaPredicted RBP12.02□□□□□ -0.49
SNX3-204ENST00000426155 C12orf10Q9HB07 376 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 TMEM27Q9HBJ8 222 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 SLC7A10Q9NS82 523 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 SLC9A8Q9Y2E8 581 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 MAP1AP78559 2803 aaPredicted RBP12.02□□□□□ -0.49
SNX3-204ENST00000426155 PRRC2AP48634 2157 aaKnown RBP12.02□□□□□ -0.49
SNX3-204ENST00000426155 HIVEP1P15822 2718 aa12.02□□□□□ -0.49
SNX3-204ENST00000426155 DSCAMO60469 2012 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 A0A087WUJ7 227 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 A0A1W2PR80 420 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 GMNCA6NCL1 334 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 NME4O00746 187 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 ATE1O95260 518 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 LYPD3O95274 346 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 ITGA5P08648 1049 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 GTF2E2P29084 291 aaKnown RBP12.01□□□□□ -0.49
SNX3-204ENST00000426155 GRPRP30550 384 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 SELENOPP49908 381 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 NUDT2P50583 147 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 SLC7A2P52569 658 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 LTBQ06643 244 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 BEX5Q5H9J7 111 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 FAM91A1Q658Y4 838 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 TMEM225Q6GV28 225 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 AAED1Q7RTV5 226 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 CPLX4Q7Z7G2 160 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 EPHX4Q8IUS5 362 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 SLC15A3Q8IY34 581 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 ZNF433Q8N7K0 673 aaPredicted RBP12.01□□□□□ -0.49
SNX3-204ENST00000426155 OR2T12Q8NG77 320 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 MOGAT1Q96PD6 335 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 OR10A4Q9H209 315 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 UBTD1Q9HAC8 227 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 MALT1Q9UDY8 824 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 SH3GLB1Q9Y371 365 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 F8P00451 2351 aa12.01□□□□□ -0.49
SNX3-204ENST00000426155 ITPR3Q14573 2671 aa12□□□□□ -0.49
SNX3-204ENST00000426155 TRAV36DV7A0A075B6V5 113 aa12□□□□□ -0.49
SNX3-204ENST00000426155 KPNA4O00629 521 aaPredicted RBP12□□□□□ -0.49
SNX3-204ENST00000426155 FMO6PO60774 539 aa12□□□□□ -0.49
SNX3-204ENST00000426155 BGLAPP02818 100 aa12□□□□□ -0.49
SNX3-204ENST00000426155 RAF1P04049 648 aa12□□□□□ -0.49
SNX3-204ENST00000426155 C8BP07358 591 aa12□□□□□ -0.49
SNX3-204ENST00000426155 DNASE1P24855 282 aa12□□□□□ -0.49
SNX3-204ENST00000426155 OR1E2P47887 323 aa12□□□□□ -0.49
SNX3-204ENST00000426155 LIPEQ05469 1076 aa12□□□□□ -0.49
SNX3-204ENST00000426155 VEZF1Q14119 521 aa12□□□□□ -0.49
SNX3-204ENST00000426155 KEAP1Q14145 624 aa12□□□□□ -0.49
SNX3-204ENST00000426155 FAM69AQ5T7M9 428 aa12□□□□□ -0.49
SNX3-204ENST00000426155 C8orf82Q6P1X6 216 aaPredicted RBP12□□□□□ -0.49
SNX3-204ENST00000426155 ERICH5Q6P6B1 374 aa12□□□□□ -0.49
SNX3-204ENST00000426155 CREB3L2Q70SY1 520 aa12□□□□□ -0.49
SNX3-204ENST00000426155 CARM1Q86X55 608 aa12□□□□□ -0.49
SNX3-204ENST00000426155 MICU2Q8IYU8 434 aa12□□□□□ -0.49
SNX3-204ENST00000426155 ADAMTS16Q8TE57 1224 aa12□□□□□ -0.49
SNX3-204ENST00000426155 NINJ1Q92982 152 aa12□□□□□ -0.49
SNX3-204ENST00000426155 TMEM45BQ96B21 275 aa12□□□□□ -0.49
SNX3-204ENST00000426155 ALKBH3Q96Q83 286 aaPredicted RBP12□□□□□ -0.49
SNX3-204ENST00000426155 SF3B5Q9BWJ5 86 aaKnown RBP12□□□□□ -0.49
SNX3-204ENST00000426155 HDHD5Q9BXW7 423 aa12□□□□□ -0.49
SNX3-204ENST00000426155 NSRP1Q9H0G5 558 aaKnown RBP12□□□□□ -0.49
SNX3-204ENST00000426155 ASB6Q9NWX5 421 aa12□□□□□ -0.49
SNX3-204ENST00000426155 NPAP1Q9NZP6 1156 aa12□□□□□ -0.49
SNX3-204ENST00000426155 SELENONQ9NZV5 590 aa12□□□□□ -0.49
SNX3-204ENST00000426155 B3GAT1Q9P2W7 334 aa12□□□□□ -0.49
SNX3-204ENST00000426155 SLC7A7Q9UM01 511 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms