RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 PRAMEF11O60813 436 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 GUCA1CO95843 209 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 LGI1O95970 557 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 NDUFB10O96000 172 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 IFNGP01579 166 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 APOC3P02656 99 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 C9P02748 559 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TSPAN19P0C672 248 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 IGHV4-38-2P0DP08 117 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ERVK-10P10266 1014 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 COX5BP10606 129 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 FOLR2P14207 255 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MMP9P14780 707 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CD1EP15812 388 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 DPEP1P16444 411 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PGAM1P18669 254 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CYP2B6P20813 491 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 IGFBP5P24593 272 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 DNASE1P24855 282 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 GCH1P30793 250 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CALCRP30988 508 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 LCN1P31025 176 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SDC4P31431 198 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SDC2P34741 201 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MMP12P39900 470 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MAGEA3P43357 314 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MAP2K4P45985 399 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 RGS6P49758 472 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 GSK3BP49841 420 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SULT1E1P49888 294 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 RAB5CP51148 216 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 LIMK2P53671 638 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PNLIPRP2P54317 469 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 LINC01547P58512 204 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 KIAA1024LP59773 190 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 DNAJB13P59910 316 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ACTR1AP61163 376 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PSMC6P62333 389 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ERVK-25P63136 954 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MAT1AQ00266 395 aaKnown RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC3A1Q07837 685 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 GRB7Q14451 532 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MELKQ14680 651 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TAF13Q15543 124 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TAF1AQ15573 450 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 STXBP2Q15833 593 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 NTRK2Q16620 822 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TAZQ16635 292 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 GUCA2BQ16661 112 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PTPN20Q4JDL3 420 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 AARDQ4LEZ3 155 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SBK1Q52WX2 424 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR2B11Q5JQS5 317 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 NHLRC3Q5JS37 347 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 KRBOX4Q5JUW0 171 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SPANXN3Q5MJ09 141 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 HACD4Q5VWC8 232 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MLIPQ5VWP3 458 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TPGS2Q68CL5 300 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PTRHD1Q6GMV3 140 aaKnown RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 DHRS7BQ6IAN0 325 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF790Q6PG37 636 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TMEM107Q6UX40 140 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 RBMS3Q6XE24 437 aaKnown RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 HSDL2Q6YN16 418 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 C17orf107Q6ZR85 190 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 BRINP3Q76B58 766 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SZRD1Q7Z422 152 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 DPPA2Q7Z7J5 298 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TRPT1Q86TN4 253 aaKnown RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PIGZQ86VD9 579 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC47A2Q86VL8 602 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ANKRD46Q86W74 232 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 PDZD9Q8IXQ8 264 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CRYBG2Q8N1P7 616 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 MS4A15Q8N5U1 240 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CLDN22Q8N7P3 220 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 NKAIN3Q8N8D7 197 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 UXS1Q8NBZ7 420 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF248Q8NDW4 579 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TRPV1Q8NER1 839 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR4F6Q8NGB9 312 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR52E4Q8NGH9 312 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 OR2T11Q8NH01 316 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 AKR7LQ8NHP1 331 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CHURC1Q8WUH1 139 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 UCN3Q969E3 161 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ANKRD9Q96BM1 317 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 ZNF524Q96C55 264 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 NSUN4Q96CB9 384 aaKnown RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 OTUB1Q96FW1 271 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SFXN2Q96NB2 322 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 COL21A1Q96P44 957 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 RBP7Q96R05 134 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 SLC22A12Q96S37 553 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 CCNL2Q96S94 520 aaPredicted RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 BARD1Q99728 777 aaKnown RBP3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 TMEM175Q9BSA9 504 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 C2orf88Q9BSF0 95 aa3.01□□□□□ -1.93
SDCBPP3-201ENST00000419629 INPP5KQ9BT40 448 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms