RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 PATE1Q8WXA2 126 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 FAM3CQ92520 227 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 SLC25A38Q96DW6 304 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 WDR89Q96FK6 387 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 SFXN2Q96NB2 322 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 TSSK2Q96PF2 358 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 STACQ99469 402 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 C1QTNF7Q9BXJ2 289 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 MKKSQ9NPJ1 570 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 CHRNA9Q9UGM1 479 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 OR6C68A6NDL8 312 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 GSTZ1O43708 216 aaPredicted RBP13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 ZFPL1O95159 310 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 AP3S2P59780 193 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 CDONQ4KMG0 1287 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 C9orf50Q5SZB4 431 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 TMEM65Q6PI78 240 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 RNF44Q7L0R7 432 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 SYS1Q8N2H4 156 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 SGTBQ96EQ0 304 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 ARPC5LQ9BPX5 153 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 TRIM2Q9C040 744 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 TCF7L1Q9HCS4 588 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 KLF15Q9UIH9 416 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 V9GY05 133 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 PTPRSQ13332 1948 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 G3V3Q6 166 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 OR8G3PP0DMU2 310 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 CAPZA2P47755 286 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 NANOS3P60323 173 aaKnown RBP13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 RPS15P62841 145 aaKnown RBP13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 LINC00303Q3SY05 128 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 STPG1Q5TH74 334 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 FCRL6Q6DN72 434 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 GATSQ8NAP1 163 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 MOSPD2Q8NHP6 518 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 GFI1Q99684 422 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 ZFYVE21Q9BQ24 234 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 ACTR10Q9NZ32 417 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 PRELID1Q9Y255 219 aa13.91□□□□□ -0.18
SEMA3B-203ENST00000419007 GABARAPH6UMI1 98 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 AIPO00170 330 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 PRKNO60260 465 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 ATF4P18848 351 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 ACAA2P42765 397 aaKnown RBP13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 FHL1Q13642 323 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 ZNF761Q86XN6 746 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 OR52B4Q8NGK2 314 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 KXD1Q9BQD3 176 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 DNAJB12Q9NXW2 375 aaKnown RBP13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 MPDZO75970 2070 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 PDCD5O14737 125 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 RDH16O75452 317 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 ECDO95905 644 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 PROS1P07225 676 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 SMIM10L1P0DMW3 83 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 RRASP10301 218 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 SPI1P17947 270 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 CDK2P24941 298 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 PGDP52209 483 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 HTR4Q13639 388 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 GPR18Q14330 331 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 ZNHIT3Q15649 155 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 DEFB110Q30KQ9 67 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 OR5M10Q6IEU7 315 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 NHLRC1Q6VVB1 395 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 HEATR5AQ86XA9 2040 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 TM4SF19Q96DZ7 209 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 DNAJA3Q96EY1 480 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 SMIM10Q96HG1 83 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 CCDC3Q9BQI4 270 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 GINS4Q9BRT9 223 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 ZNF281Q9Y2X9 895 aa13.9□□□□□ -0.18
SEMA3B-203ENST00000419007 A0A087WV62 115 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 OR2W5A6NFC9 320 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 KCNJ13O60928 360 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 SIX6O95475 246 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 RLN1P04808 185 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 DIO1P49895 249 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 CCR4P51679 360 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 LEG1Q6P5S2 330 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 CMIPQ8IY22 773 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 OR14A16Q8NHC5 309 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 RBPMSQ93062 196 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 TRPV4Q9HBA0 871 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 FBXL21Q9UKT6 434 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 POMT2Q9UKY4 750 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 ENTPD2Q9Y5L3 495 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 LINC01553A4QN01 128 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 PRR19A6NJB7 356 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 HRKO00198 91 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 CREBL2O60519 120 aaPredicted RBP13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 AK1P00568 194 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 IGKV1D-16P01601 117 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 MAS1P04201 325 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 PTGS2P35354 604 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 ADPRHP54922 357 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 KIR2DS3Q14952 304 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 TMEM31Q5JXX7 168 aa13.89□□□□□ -0.19
SEMA3B-203ENST00000419007 ULK3Q6PHR2 472 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms