RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HCRTR2O43614 444 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ZIC3O60481 467 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 DOK2O60496 412 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 BCAS1O75363 584 aaPredicted RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 TGDSO95455 350 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 H6PDO95479 791 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 NUDT14O95848 222 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 IL6P05231 212 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 BCHEP06276 602 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 KRT16P08779 473 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 CSF1P09603 554 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 GP1BBP13224 206 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 IL11P20809 199 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 CHMP24386 653 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 SRD5A2P31213 254 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 LIPAP38571 399 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 MDH1P40925 334 aaKnown RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 CRATP43155 626 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 SMSP52788 366 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 SUCLG1P53597 346 aaKnown RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 DSCR4P56555 118 aaPredicted RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 CLDN18P56856 261 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 CLDN20P56880 219 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 B3GALT5-AS1P59052 145 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 PSPHP78330 225 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 RPP30P78346 268 aaKnown RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 C17orf67Q0P5P2 114 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 SNTB1Q13884 538 aaKnown RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 SQLEQ14534 574 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 TOMM34Q15785 309 aaPredicted RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 ZNF124Q15973 351 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 MAPK14Q16539 360 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ARHGAP11BQ3KRB8 267 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ACSF3Q4G176 576 aaPredicted RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 RABL3Q5HYI8 236 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 PAGE3Q5JUK9 113 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 FAM205BPQ63HN1 556 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 TYW3Q6IPR3 259 aaKnown RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 BHLHB9Q6PI77 547 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 CBLN3Q6UW01 205 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 B3GNT6Q6ZMB0 384 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 FRRS1Q6ZNA5 592 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 P3H2Q8IVL5 708 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 C10orf111Q8N326 155 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ARFGAP2Q8N6H7 521 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 TRIML2Q8N7C3 387 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 POU5F2Q8N7G0 328 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 CHDHQ8NE62 594 aaPredicted RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 ATP6V1C2Q8NEY4 427 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 TNIP2Q8NFZ5 429 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 GOT1L1Q8NHS2 421 aaPredicted RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 B4GALNT2Q8NHY0 566 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 Q8TCH9 128 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ZFP90Q8TF47 636 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 GTF2H4Q92759 462 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ZNF524Q96C55 264 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ROPN1LQ96C74 230 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ZG16BQ96DA0 208 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 SPDL1Q96EA4 605 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 DNAJA3Q96EY1 480 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ZNF845Q96IR2 970 aaPredicted RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 RSRC1Q96IZ7 334 aaKnown RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 ITCHQ96J02 903 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 RNF145Q96MT1 663 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 TUBA1CQ9BQE3 449 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 TTYH2Q9BSA4 534 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 RABEP2Q9H5N1 569 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 MED4Q9NPJ6 270 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 SDHAF3Q9NRP4 125 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 UBQLN4Q9NRR5 601 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 EXD2Q9NVH0 621 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ZNF337Q9Y3M9 751 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 WDR45Q9Y484 360 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 RNF114Q9Y508 228 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 FBN2P35556 2912 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 TEX15Q9BXT5 2789 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 APCP25054 2843 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 SERINC4A6NH21 518 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 MBD3L5A6NJ08 208 aaPredicted RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 DUXAA6NLW8 204 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 NPIPB9F8W1W9 429 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 GTPBP1O00178 669 aaKnown RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 SPRY2O43597 315 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 WDR1O75083 606 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 STX11O75558 287 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 TIPRLO75663 272 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 UGT2B17O75795 530 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 TOXO94900 526 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 CLDN14O95500 239 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 KRT75O95678 551 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 TGM6O95932 706 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 ACTL6AO96019 429 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 FESP07332 822 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 NGFRP08138 427 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 CHRM4P08173 479 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 UBTFL6P0CB48 400 aaPredicted RBP4.37□□□□□ -1.71
VPS41-205ENST00000414632 TROVE2P10155 538 aaKnown RBP eCLIP4.37□□□□□ -1.71
VPS41-205ENST00000414632 NR2F1P10589 423 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 UBL4AP11441 157 aa4.37□□□□□ -1.71
VPS41-205ENST00000414632 CCNA2P20248 432 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms