RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 VSTM2BA6NLU5 285 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 GP1BBP13224 206 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 NAGAP17050 411 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 CXCR1P25024 350 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 HTR3AP46098 478 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 CCL7P80098 99 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 DCDP81605 110 aaKnown RBP18.35■□□□□ 0.53
SUMO3-204ENST00000411651 LTBQ06643 244 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 SCN1BQ07699 218 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 ZNF385CQ66K41 422 aaPredicted RBP18.35■□□□□ 0.53
SUMO3-204ENST00000411651 RPL22L1Q6P5R6 122 aaKnown RBP18.35■□□□□ 0.53
SUMO3-204ENST00000411651 ARL9Q6T311 187 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 TRILQ7L0X0 811 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 NANOGNBQ7Z5D8 188 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 ABHD4Q8TB40 342 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 OR6C1Q96RD1 312 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 SNX18Q96RF0 628 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 TTYH2Q9BSA4 534 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 RNF32Q9H0A6 362 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 SLC26A1Q9H2B4 701 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 KLHL1Q9NR64 748 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 ATXN7L1Q9ULK2 861 aaPredicted RBP18.35■□□□□ 0.53
SUMO3-204ENST00000411651 TBC1D24Q9ULP9 559 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 IDSB3KWA1 339 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 E9PI62 339 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 BLOC1S5-TXNDC5H3BN57 136 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 SCRG1O75711 98 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 DLGAP3O95886 979 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 BGLAPP02818 100 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 HIST1H2ABP04908 130 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 IL7P13232 177 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 MYL9P24844 172 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 POLR2HP52434 150 aaKnown RBP18.35■□□□□ 0.53
SUMO3-204ENST00000411651 DLX5P56178 289 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 CTXN1P60606 82 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 MRPL28Q13084 256 aaKnown RBP18.35■□□□□ 0.53
SUMO3-204ENST00000411651 CDK5R1Q15078 307 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 GDPD3Q7L5L3 318 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 HIST3H2AQ7L7L0 130 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 OVCH1Q7RTY7 1134 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 MARCH3Q86UD3 253 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 PRSS58Q8IYP2 241 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 OR8H2Q8N162 312 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 C10orf53Q8N6V4 93 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 APCDD1LQ8NCL9 501 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 OR6S1Q8NH40 331 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 RPS4Y2Q8TD47 263 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 HIST1H2ACQ93077 130 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 RASD2Q96D21 266 aa18.35■□□□□ 0.53
SUMO3-204ENST00000411651 KTI12Q96EK9 354 aaPredicted RBP18.35■□□□□ 0.53
SUMO3-204ENST00000411651 UBL7Q96S82 380 aaPredicted RBP18.35■□□□□ 0.53
SUMO3-204ENST00000411651 TRAV1-2A0A0B4J238 106 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 CDC14CA4D256 554 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 GPRIN2O60269 458 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 NPIPB7O75200 414 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 ALOX12BO75342 701 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 GATBO75879 557 aaKnown RBP18.34■□□□□ 0.53
SUMO3-204ENST00000411651 HEXBP07686 556 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 PYCR1P32322 319 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 SUMO3P55854 103 aaPredicted RBP18.34■□□□□ 0.53
SUMO3-204ENST00000411651 RPL18Q07020 188 aaKnown RBP18.34■□□□□ 0.53
SUMO3-204ENST00000411651 LEG1Q6P5S2 330 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 SSX6Q7RTT6 188 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 GRINAQ7Z429 371 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 KCTD20Q7Z5Y7 419 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 OR5J2Q8NH18 312 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 STK35Q8TDR2 534 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 RNF138Q8WVD3 245 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 PELI1Q96FA3 418 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 TXNDC15Q96J42 360 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 Q96M85 177 aa18.34■□□□□ 0.53
SUMO3-204ENST00000411651 ANKRD61A6NGH8 418 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 HLA-DQB1P01920 261 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 CDKN2AP42771 156 aaKnown RBP18.33■□□□□ 0.53
SUMO3-204ENST00000411651 SIRPAP78324 504 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 E2F1Q01094 437 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 ASAH1Q13510 395 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 CCBE1Q6UXH8 406 aaPredicted RBP18.33■□□□□ 0.53
SUMO3-204ENST00000411651 LSRQ86X29 649 aaPredicted RBP18.33■□□□□ 0.53
SUMO3-204ENST00000411651 LSM14AQ8ND56 463 aaKnown RBP18.33■□□□□ 0.53
SUMO3-204ENST00000411651 SNX33Q8WV41 574 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 METTL21AQ8WXB1 218 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 HTRA1Q92743 480 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 TAAR8Q969N4 342 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 ZNF524Q96C55 264 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 ALG12Q9BV10 488 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.33■□□□□ 0.532e-6■■■■□ 25
SUMO3-204ENST00000411651 NCDNQ9UBB6 729 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 GRHPRQ9UBQ7 328 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 GRIP1Q9Y3R0 1128 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 NPFFR2Q9Y5X5 522 aa18.33■□□□□ 0.53
SUMO3-204ENST00000411651 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.33■□□□□ 0.52
SUMO3-204ENST00000411651 ADAM10O14672 748 aa18.33■□□□□ 0.52
SUMO3-204ENST00000411651 ITPKBP27987 946 aa18.33■□□□□ 0.52
SUMO3-204ENST00000411651 EVX1P49640 407 aa18.33■□□□□ 0.52
SUMO3-204ENST00000411651 SLC6A19Q695T7 634 aa18.33■□□□□ 0.52
SUMO3-204ENST00000411651 SLC16A9Q7RTY1 509 aa18.33■□□□□ 0.52
SUMO3-204ENST00000411651 MAMDC2Q7Z304 686 aaPredicted RBP18.33■□□□□ 0.52
SUMO3-204ENST00000411651 SLC38A9Q8NBW4 561 aa18.33■□□□□ 0.52
SUMO3-204ENST00000411651 OR2T4Q8NH00 348 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms