RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 CDK5R1Q15078 307 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 CSRP2Q16527 193 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 TIGD4Q8IY51 512 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 IZUMO1Q8IYV9 350 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 SMIM19Q96E16 107 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 HYLS1Q96M11 299 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 CNN2Q99439 309 aaKnown RBP13.94□□□□□ -0.18
LIMK2-204ENST00000406516 PDCD1LG2Q9BQ51 273 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 LRRC61Q9BV99 259 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 GSDMCQ9BYG8 508 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 CPNE7Q9UBL6 633 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 CHRNA9Q9UGM1 479 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 NPFFR2Q9Y5X5 522 aa13.94□□□□□ -0.18
LIMK2-204ENST00000406516 CABIN1Q9Y6J0 2220 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 A0A1B0GTQ1 180 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 TCRBP04435 133 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 EPXP11678 715 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 STOMP27105 288 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 RPL4P36578 427 aaKnown RBP13.93□□□□□ -0.18
LIMK2-204ENST00000406516 PSMB10P40306 273 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 CCR6P51684 374 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 GBX2P52951 348 aaPredicted RBP13.93□□□□□ -0.18
LIMK2-204ENST00000406516 RNF44Q7L0R7 432 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 OR7G1Q8NGA0 311 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 OR11H7Q8NGC8 314 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 ZNRF4Q8WWF5 429 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 RSC1A1Q92681 617 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 ORAI1Q96D31 301 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 TWSG1Q9GZX9 223 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 POLE3Q9NRF9 147 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 DTX4Q9Y2E6 619 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 TRBV2A0A0J9YWF9 115 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 A0A0J9YY10 115 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 CDX4O14627 284 aaPredicted RBP13.93□□□□□ -0.18
LIMK2-204ENST00000406516 GDF9O60383 454 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 SERPINI2O75830 405 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 PIAS2O75928 621 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 UBL3O95164 117 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 NDUFB2O95178 105 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 SERPINA3P01011 423 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 CTSEP14091 401 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 RBM34P42696 430 aaKnown RBP13.93□□□□□ -0.18
LIMK2-204ENST00000406516 ZNHIT3Q15649 155 aaPredicted RBP13.93□□□□□ -0.18
LIMK2-204ENST00000406516 PRSS45Q7RTY3 260 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 SLC35F2Q8IXU6 374 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 SLC25A45Q8N413 288 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 C9orf62Q8N4C0 152 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 TEX19Q8NA77 164 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 LMX1AQ8TE12 382 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 PMM1Q92871 262 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 SCMH1Q96GD3 660 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 TRAF4Q9BUZ4 470 aaPredicted RBP13.93□□□□□ -0.18
LIMK2-204ENST00000406516 GHITMQ9H3K2 345 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 RPS6KB2Q9UBS0 482 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 SLC23A1Q9UHI7 598 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 TEKT2Q9UIF3 430 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 SERTAD3Q9UJW9 196 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 PCDH15Q96QU1 1955 aa13.93□□□□□ -0.18
LIMK2-204ENST00000406516 SPEGQ15772 3267 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 TRAV1-2A0A0B4J238 106 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 TEX13CA0A0J9YWL9 993 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 SLC35E2P0CK97 266 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 ATXN8OSP0DMR3 200 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 EDNRAP25101 427 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 ARRB1P49407 418 aaPredicted RBP13.92□□□□□ -0.18
LIMK2-204ENST00000406516 BLKP51451 505 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 RAB38P57729 211 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 HNRNPKP61978 463 aaKnown RBP eCLIP13.92□□□□□ -0.181e-6■■□□□ 13
LIMK2-204ENST00000406516 ACTA2P62736 377 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 ACTG2P63267 376 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 SIRPAP78324 504 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 CEP78Q5JTW2 689 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 CREB3L2Q70SY1 520 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 ZNF671Q8TAW3 534 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 DACT3Q96B18 629 aaPredicted RBP13.92□□□□□ -0.18
LIMK2-204ENST00000406516 NMNAT3Q96T66 252 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 C7orf66A4D0T2 115 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 OGG1O15527 345 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 SELENOFO60613 162 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 ARL6IP5O75915 188 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 MT-ND4P03905 459 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 OR2T7P0C7T2 308 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 TYRP1P17643 537 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 CAPZA2P47755 286 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 RPS11P62280 158 aaKnown RBP eCLIP13.92□□□□□ -0.18
LIMK2-204ENST00000406516 GRAMD2AQ8IUY3 354 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 OR6K6Q8NGW6 343 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 OR2T27Q8NH04 317 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 ZPLD1Q8TCW7 415 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 CACNG6Q9BXT2 260 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 FAM60AQ9NP50 221 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 STMN3Q9NZ72 180 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 HCN3Q9P1Z3 774 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 ENTPD2Q9Y5L3 495 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 NUBP2Q9Y5Y2 271 aa13.92□□□□□ -0.18
LIMK2-204ENST00000406516 TDRD6O60522 2096 aaKnown RBP13.92□□□□□ -0.18
LIMK2-204ENST00000406516 OR2W5A6NFC9 320 aa13.91□□□□□ -0.18
LIMK2-204ENST00000406516 PSMD9O00233 223 aa13.91□□□□□ -0.18
LIMK2-204ENST00000406516 NDUFB5O43674 189 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms