RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 GNB3P16520 340 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 SRMP19623 302 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 MAKP20794 623 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PTAFRP25105 342 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 OR10A3P58181 314 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ADIRFQ15847 76 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 IAH1Q2TAA2 248 aaPredicted RBP9.11□□□□□ -0.95
HERC3-202ENST00000402738 LYPD8Q6UX82 237 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 OLIG3Q7RTU3 272 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 LRRTM3Q86VH5 581 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 LKAAEAR1Q8TD35 194 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 RBMXL1Q96E39 390 aaKnown RBP9.11□□□□□ -0.95
HERC3-202ENST00000402738 SLC25A21Q9BQT8 299 aaPredicted RBP9.11□□□□□ -0.95
HERC3-202ENST00000402738 MED18Q9BUE0 208 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 MCOLN1Q9GZU1 580 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 GCM1Q9NP62 436 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ISYNA1Q9NPH2 558 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ELOVL2Q9NXB9 296 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ALKBH4Q9NXW9 302 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 SIGLEC1Q9BZZ2 1709 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 FMN2Q9NZ56 1722 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 C4AP0C0L4 1744 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 C4BP0C0L5 1744 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 NUDT19A8MXV4 375 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PGCP20142 388 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 HTR2CP28335 458 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 KCNJ10P78508 379 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 GPR18Q14330 331 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 C2orf27AQ580R0 203 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 FBXW12Q6X9E4 464 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 RBM45Q8IUH3 476 aaKnown RBP9.11□□□□□ -0.95
HERC3-202ENST00000402738 EID2Q8N6I1 236 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ZNF439Q8NDP4 499 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 BCL7CQ8WUZ0 217 aaPredicted RBP9.11□□□□□ -0.95
HERC3-202ENST00000402738 ASB11Q8WXH4 323 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 TRMT2BQ96GJ1 504 aaKnown RBP9.11□□□□□ -0.95
HERC3-202ENST00000402738 LINC00052Q96N35 136 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PDCD1LG2Q9BQ51 273 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PTDSS2Q9BVG9 487 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 B3GAT2Q9NPZ5 323 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 SLC22A11Q9NSA0 550 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PPT2Q9UMR5 302 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.11□□□□□ -0.95
HERC3-202ENST00000402738 YKT6O15498 198 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 OR2T7P0C7T2 308 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 HOXC12P31275 282 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 SBSNQ6UWP8 590 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 SYT9Q86SS6 491 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 BAGE3Q86Y29 109 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 BAGE2Q86Y30 109 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 CMTM1Q8IZ96 169 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ZNF611Q8N823 705 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 OR2T27Q8NH04 317 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ZNF385DQ9H6B1 395 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PELI2Q9HAT8 420 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 EXO1Q9UQ84 846 aaKnown RBP9.11□□□□□ -0.95
HERC3-202ENST00000402738 OR5H14A6NHG9 310 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PTGESO14684 152 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 OR2T1O43869 369 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 XCR1P46094 333 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PLCXD2Q0VAA5 305 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 LPCAT3Q6P1A2 487 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 DPY19L4Q7Z388 723 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 PRICKLE2Q7Z3G6 844 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 MDGA2Q7Z553 956 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 CDRT4Q8N9R6 151 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 OR5D14Q8NGL3 314 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 OR6T1Q8NGN1 323 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 TMEM174Q8WUU8 243 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 SORCS2Q96PQ0 1159 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 HINT2Q9BX68 163 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 AUNIPQ9H7T9 357 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 CXorf36Q9H7Y0 433 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 HRASLS2Q9NWW9 162 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 KCMF1Q9P0J7 381 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ETV7Q9Y603 341 aa9.11□□□□□ -0.95
HERC3-202ENST00000402738 ZAR1LA6NP61 321 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 CD300LBA8K4G0 201 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 HIDE1A8MVS5 230 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 NFKBIEO00221 500 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 TGOLN2O43493 480 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 KLF8O95600 359 aaPredicted RBP9.1□□□□□ -0.95
HERC3-202ENST00000402738 LGI1O95970 557 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 HBE1P02100 147 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 IMPA1P29218 277 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 SOX18P35713 384 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 OR7A5Q15622 319 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 CCL14Q16627 93 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 TMEM244Q5VVB8 128 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 CST9LP1Q5W188 147 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 ZNF836Q6ZNA1 936 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 Q6ZTK2 550 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 CHTF18Q8WVB6 975 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 C16orf70Q9BSU1 422 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 SYT17Q9BSW7 474 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 C1orf123Q9NWV4 160 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 A0A1B0GUH1 482 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 ZNF840PA6NDX5 716 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 F2P00734 622 aa9.1□□□□□ -0.95
HERC3-202ENST00000402738 PMP2P02689 132 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms