RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 IGHA1P01876 353 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 HIST1H2ABP04908 130 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 APEHP13798 732 aaKnown RBP23.17■■□□□ 1.3
CPNE1-205ENST00000401607 PAICSP22234 425 aaKnown RBP23.17■■□□□ 1.3
CPNE1-205ENST00000401607 CTXN1P60606 82 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 HIST3H2AQ7L7L0 130 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 MAMDC2Q7Z304 686 aaPredicted RBP23.17■■□□□ 1.3
CPNE1-205ENST00000401607 RAB43Q86YS6 212 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 NPEPL1Q8NDH3 523 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 PSMF1Q92530 271 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 HIST1H2ACQ93077 130 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 SLC25A36Q96CQ1 311 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 MRGPRX4Q96LA9 322 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 Q96M85 177 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 TEAD3Q99594 435 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 SLC22A31A6NKX4 558 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 AHSA1O95433 338 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 F13BP05160 661 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 LIMS3P0CW19 117 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 LIMS4P0CW20 117 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 CSRP1P21291 193 aaKnown RBP23.17■■□□□ 1.3
CPNE1-205ENST00000401607 RGS6P49758 472 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 TMED1Q13445 227 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 SPCS2Q15005 226 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 OR51G2Q8NGK0 314 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 OR9Q1Q8NGQ5 310 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 RPL3LQ92901 407 aaKnown RBP23.17■■□□□ 1.3
CPNE1-205ENST00000401607 RELTQ969Z4 430 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 C1GALT1C1Q96EU7 318 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 MYCBPQ99417 103 aaPredicted RBP23.17■■□□□ 1.3
CPNE1-205ENST00000401607 ZNF649Q9BS31 505 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 TAS2R5Q9NYW4 299 aa23.17■■□□□ 1.3
CPNE1-205ENST00000401607 TEX13CA0A0J9YWL9 993 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 TMEM129A0AVI4 362 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 FTCDNL1E5RQL4 147 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 M0R3G1 203 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 IMPA2O14732 288 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 EFNA2O43921 213 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 GYPBP06028 91 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 SGCBQ16585 318 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 TSTQ16762 297 aaKnown RBP23.16■■□□□ 1.3
CPNE1-205ENST00000401607 ARMC4Q5T2S8 1044 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 SLC22A10Q63ZE4 541 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 OR4K17Q8NGC6 315 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 OR5J2Q8NH18 312 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 ZPLD1Q8TCW7 415 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 NMNAT3Q96T66 252 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 JAM3Q9BX67 310 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 TNFRSF10DQ9UBN6 386 aa23.16■■□□□ 1.3
CPNE1-205ENST00000401607 EML6Q6ZMW3 1958 aa23.15■■□□□ 1.3
CPNE1-205ENST00000401607 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-205ENST00000401607 ZNF208O43345 1280 aa23.15■■□□□ 1.3
CPNE1-205ENST00000401607 TXNDC12O95881 172 aa23.15■■□□□ 1.3
CPNE1-205ENST00000401607 IL11P20809 199 aa23.15■■□□□ 1.3
CPNE1-205ENST00000401607 GRPRP30550 384 aa23.15■■□□□ 1.3
CPNE1-205ENST00000401607 RPS7P62081 194 aaKnown RBP23.15■■□□□ 1.3
CPNE1-205ENST00000401607 PLCZ1Q86YW0 608 aa23.15■■□□□ 1.3
CPNE1-205ENST00000401607 LSM14AQ8ND56 463 aaKnown RBP23.15■■□□□ 1.3
CPNE1-205ENST00000401607 OR6S1Q8NH40 331 aa23.15■■□□□ 1.3
CPNE1-205ENST00000401607 ARL5BQ96KC2 179 aa23.15■■□□□ 1.3
CPNE1-205ENST00000401607 CHCHD3Q9NX63 227 aaKnown RBP23.15■■□□□ 1.3
CPNE1-205ENST00000401607 CDRT15L2A8MXV6 281 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 SCG5P05408 212 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 GADD45AP24522 165 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 SDHAP31040 664 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 LSM3P62310 102 aaKnown RBP23.14■■□□□ 1.3
CPNE1-205ENST00000401607 SSX1Q16384 188 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 ACER2Q5QJU3 275 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 OR2G6Q5TZ20 316 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 MDGA2Q7Z553 956 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 LHFPL3Q86UP9 236 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 PSD4Q8NDX1 1056 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 TSPAN32Q96QS1 320 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 RACGAP1Q9H0H5 632 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 EP300Q09472 2414 aaPredicted RBP23.14■■□□□ 1.3
CPNE1-205ENST00000401607 KNTC1P50748 2209 aa23.14■■□□□ 1.3
CPNE1-205ENST00000401607 OR6C68A6NDL8 312 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 OR2T1O43869 369 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 ATP6V1E1P36543 226 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 CD79BP40259 229 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 SLC16A1P53985 500 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 WNT4P56705 351 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 SLC6A19Q695T7 634 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 C19orf48Q6RUI8 117 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 DTX1Q86Y01 620 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 IL22RA1Q8N6P7 574 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 THOC3Q96J01 351 aaKnown RBP23.14■■□□□ 1.29
CPNE1-205ENST00000401607 NMNAT2Q9BZQ4 307 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 NDEL1Q9GZM8 345 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 ANKRD10Q9NXR5 420 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 HAO2Q9NYQ3 351 aa23.14■■□□□ 1.29
CPNE1-205ENST00000401607 TM4SF5O14894 197 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 SNPHO15079 494 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 DXOO77932 396 aaKnown RBP23.13■■□□□ 1.29
CPNE1-205ENST00000401607 ZNF182P17025 639 aaPredicted RBP23.13■■□□□ 1.29
CPNE1-205ENST00000401607 CD82P27701 267 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 PEX19P40855 299 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 CDKN2AP42771 156 aaKnown RBP23.13■■□□□ 1.29
CPNE1-205ENST00000401607 NCS1P62166 190 aa23.13■■□□□ 1.29
CPNE1-205ENST00000401607 FOXK1P85037 733 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms