RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 FPR3P25089 353 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 TRIM61Q5EBN2 209 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 DNAJC5GQ8N7S2 189 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 BEST4Q8NFU0 473 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 UBE2FQ969M7 185 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 NRSN2Q9GZP1 204 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 NT5DC2Q9H857 520 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 ZFP57Q9NU63 452 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 COL18A1P39060 1754 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 CXCL10P02778 98 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 TRMT12Q53H54 448 aaKnown RBP16.84■□□□□ 0.29
COL18A1-204ENST00000400337 MANEAQ5SRI9 462 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 LCN10Q6JVE6 187 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 MOB3CQ70IA8 216 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 SLC16A14Q7RTX9 510 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 LILRB2Q8N423 598 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 ZNF649Q9BS31 505 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 DIMT1Q9UNQ2 313 aaKnown RBP16.84■□□□□ 0.29
COL18A1-204ENST00000400337 MYO7AQ13402 2215 aa16.84■□□□□ 0.29
COL18A1-204ENST00000400337 FZD7O75084 574 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 TRIM23P36406 574 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 IL13RA1P78552 427 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 KIF18BQ86Y91 864 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 PATE1Q8WXA2 126 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 TMEM68Q96MH6 324 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 ELF4Q99607 663 aaPredicted RBP16.83■□□□□ 0.29
COL18A1-204ENST00000400337 VRK1Q99986 396 aaPredicted RBP16.83■□□□□ 0.29
COL18A1-204ENST00000400337 C1orf198Q9H425 327 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 ZNF749O43361 778 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 ACTL6BO94805 426 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 IFNA1P01562 189 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 RAB40ALP0C0E4 278 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 CD46P15529 392 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 KDM4DQ6B0I6 523 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 METAP1DQ6UB28 335 aaPredicted RBP16.83■□□□□ 0.29
COL18A1-204ENST00000400337 LAX1Q8IWV1 398 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 GAB3Q8WWW8 586 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 RAB40AQ8WXH6 277 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 TXNL4BQ9NX01 149 aaKnown RBP16.83■□□□□ 0.29
COL18A1-204ENST00000400337 KLK4Q9Y5K2 254 aa16.83■□□□□ 0.29
COL18A1-204ENST00000400337 SCN7AQ01118 1682 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 SLC43A1O75387 559 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 ZNF44P15621 663 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 DLSTP36957 453 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 EPHA5P54756 1037 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 MMP11P24347 488 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 SHC1P29353 583 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 DUSP5Q16690 384 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 C14orf28Q4W4Y0 310 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 SLC46A3Q7Z3Q1 461 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 MARCH3Q86UD3 253 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 PPP1R35Q8TAP8 253 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 LAMB1P07942 1786 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 GAPDHSO14556 408 aaPredicted RBP16.83■□□□□ 0.28
COL18A1-204ENST00000400337 CSO75390 466 aaKnown RBP16.83■□□□□ 0.28
COL18A1-204ENST00000400337 HTR1FP30939 366 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 HTR5AP47898 357 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 ATP1B3P54709 279 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 NIPAL3Q6P499 406 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 C5orf46Q6UWT4 87 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 MKXQ8IYA7 352 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 MFFQ9GZY8 342 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 TNFRSF12AQ9NP84 129 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 SH3BGRL2Q9UJC5 107 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 DAPP1Q9UN19 280 aa16.83■□□□□ 0.28
COL18A1-204ENST00000400337 CCR2P41597 374 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 APOOLQ6UXV4 268 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 OR13C9Q8NGT0 318 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 IL1F10Q8WWZ1 152 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 SLA2Q9H6Q3 261 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 LYRM4Q9HD34 91 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 A0A1W2PR48 441 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 FAM155AB1AL88 458 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-204ENST00000400337 DPP4P27487 766 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 TEAD1P28347 426 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 BIDP55957 195 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 TAS2R19P59542 299 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 USF2Q15853 346 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-204ENST00000400337 TATDN3Q17R31 274 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 UBE2NLQ5JXB2 153 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 EXOSC6Q5RKV6 272 aaKnown RBP16.82■□□□□ 0.28
COL18A1-204ENST00000400337 OR52I1Q8NGK6 324 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 TMEM106AQ96A25 262 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 SPIN2AQ99865 258 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 SPIN2BQ9BPZ2 258 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 MMP17Q9ULZ9 603 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 NHSQ6T4R5 1651 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 TMEM212A6NML5 194 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 B4GALT3O60512 393 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 F10P00742 488 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 S100PP25815 95 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 TRHRP34981 398 aaPredicted RBP16.82■□□□□ 0.28
COL18A1-204ENST00000400337 SLX4IPQ5VYV7 408 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 AAED1Q7RTV5 226 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 TXNDC15Q96J42 360 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 PBDC1Q9BVG4 233 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 IL21Q9HBE4 155 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 SEMA4GQ9NTN9 838 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 DOK2O60496 412 aa16.82■□□□□ 0.28
COL18A1-204ENST00000400337 DPY19L2P2Q6ZN68 376 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms