RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TRNT1Q96Q11 434 aaKnown RBP7.62□□□□□ -1.19
CAPN3-208ENST00000397204 SLC38A2Q96QD8 506 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 VRK1Q99986 396 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-208ENST00000397204 RHOXF2Q9BQY4 288 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 KATNB1Q9BVA0 655 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 PLK3Q9H4B4 646 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 CA10Q9NS85 328 aa7.62□□□□□ -1.19
CAPN3-208ENST00000397204 IGHV1-18A0A0C4DH31 117 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 TLDC2A0PJX2 215 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 TMEM72A0PK05 275 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 AGAP5A6NIR3 686 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 LIPT2A6NK58 231 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 HMGN4O00479 90 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 KLF11O14901 512 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 TCF21O43680 179 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 KRT33AO76009 404 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 STAMBPO95630 424 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 CPSF4O95639 269 aaKnown RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 ERCC1P07992 297 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 NUDT17P0C025 328 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 OR4A8P0C604 315 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 UQCRBP14927 111 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 CDH2P19022 906 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 CXCR1P25024 350 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 GIFP27352 417 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 TACR3P29371 465 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 KHKP50053 298 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 TXNL4AP83876 142 aaKnown RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 HPCAP84074 193 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 SRSF2Q01130 221 aaKnown RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 CEACAM7Q14002 265 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 CASP8Q14790 479 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 ADIPOQQ15848 244 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 ZSWIM7Q19AV6 140 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 CR1LQ2VPA4 569 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 TBRG1Q3YBR2 411 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 GPAT3Q53EU6 434 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 HIKESHIQ53FT3 197 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 OTUD3Q5T2D3 398 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 SAXO2Q658L1 398 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 LRRC74BQ6ZQY2 392 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 ZCCHC23Q6ZST2 131 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 IL17RELQ6ZVW7 336 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 ZNF440Q8IYI8 595 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 TMEM99Q8N816 258 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 OR9K2Q8NGE7 335 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 KIF18AQ8NI77 898 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 MAGEE2Q8TD90 523 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 EPS8L3Q8TE67 593 aaKnown RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 NEU4Q8WWR8 484 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 BCL2L2Q92843 193 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 AURKBQ96GD4 344 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 APOPT1Q96IL0 206 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 ZNF385AQ96PM9 386 aaKnown RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 MECRQ9BV79 373 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 DPY30Q9C005 99 aa7.61□□□□□ -1.19
CAPN3-208ENST00000397204 CRNNQ9UBG3 495 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 MARCOQ9UEW3 520 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 TMEFF2Q9UIK5 374 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-208ENST00000397204 ARPC4-TTLL3A0A0A6YYG9 625 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 ZC3H12DA2A288 527 aaKnown RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 PRAMEF27A3QJZ7 478 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 CFAP73A6NFT4 308 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 AQP7P3A6NL99 342 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 CLDN24A6NM45 220 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 ZNF587BE7ETH6 402 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 AP3D1O14617 1153 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 SKAP2O75563 359 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 SNUPNO95149 360 aaKnown RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 TACSTD2P09758 323 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 DAOP14920 347 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 IL7RP16871 459 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 PCMT1P22061 227 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 ARRB2P32121 409 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 CHI3L1P36222 383 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 SRP14P37108 136 aaKnown RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 PPOXP50336 477 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 ANXA11P50995 505 aaKnown RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 CHN2P52757 468 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 UBE2NP61088 152 aaKnown RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 NAAAQ02083 359 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 FUT5Q11128 374 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 EPS8Q12929 822 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 DPY19L1Q2PZI1 675 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 TNFAIP8L2Q6P589 184 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 CREB3L2Q70SY1 520 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 SPATA19Q7Z5L4 167 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 RIBC1Q8N443 379 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 ANKS4BQ8N8V4 417 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 LINC01356Q8N9X3 169 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 NUP37Q8NFH4 326 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 IL17RDQ8NFM7 739 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 OR1K1Q8NGR3 316 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 TCP10LQ8TDR4 215 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 UTP4Q969X6 686 aaKnown RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 TESCQ96BS2 214 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 C1orf159Q96HA4 380 aa7.6□□□□□ -1.19
CAPN3-208ENST00000397204 FAM46AQ96IP4 442 aaKnown RBP7.6□□□□□ -1.19
CAPN3-208ENST00000397204 ANKRD27Q96NW4 1050 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms