RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 NUP214P35658 2090 aaPredicted RBP14.3□□□□□ -0.12
CLTA-203ENST00000396603 SONP18583 2426 aaKnown RBP14.3□□□□□ -0.12
CLTA-203ENST00000396603 ITGA5P08648 1049 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 SLC1A3P43003 542 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 FABP6P51161 128 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 RGNQ15493 299 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 GTDC1Q4AE62 458 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 SNX32Q86XE0 403 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 AURKBQ96GD4 344 aaPredicted RBP14.3□□□□□ -0.12
CLTA-203ENST00000396603 CCT8L2Q96SF2 557 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 SF3B5Q9BWJ5 86 aaKnown RBP14.3□□□□□ -0.12
CLTA-203ENST00000396603 MOV10Q9HCE1 1003 aaKnown RBP14.3□□□□□ -0.12
CLTA-203ENST00000396603 VAPAQ9P0L0 249 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 UPB1Q9UBR1 384 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 FLVCR1Q9Y5Y0 555 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 PMF1-BGLAPU3KQ54 211 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 ABCA1O95477 2261 aa14.3□□□□□ -0.12
CLTA-203ENST00000396603 CADP27708 2225 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 TMED7-TICAM2A0A0A6YYA0 188 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 AGAP5A6NIR3 686 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 RNF212BA8MTL3 300 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 C5orf58C9J3I9 102 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 MRASO14807 208 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 FAM107AO95990 144 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 WNT11O96014 354 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 IGHV3-9P01782 118 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 BMP2P12643 396 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 ETFAP13804 333 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 HOXB9P17482 250 aaPredicted RBP14.29□□□□□ -0.12
CLTA-203ENST00000396603 RPS4Y1P22090 263 aaKnown RBP14.29□□□□□ -0.12
CLTA-203ENST00000396603 MPGP29372 298 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 APOBEC3AP31941 199 aaPredicted RBP14.29□□□□□ -0.12
CLTA-203ENST00000396603 NTF4P34130 210 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 RYKP34925 604 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 IDH2P48735 452 aaKnown RBP14.29□□□□□ -0.12
CLTA-203ENST00000396603 ZNF83P51522 516 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 EFNA4P52798 201 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 OR2B6P58173 313 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 PLAURQ03405 335 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 CHRNEQ04844 493 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 SLC17A1Q14916 467 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 ZSWIM7Q19AV6 140 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 COX20Q5RI15 118 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 PRAMEF8Q5VWM4 474 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 PRAMEF7Q5VXH5 474 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 CASP12Q6UXS9 341 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 DLEU7Q6UYE1 221 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 ABHD12BQ7Z5M8 362 aaPredicted RBP14.29□□□□□ -0.12
CLTA-203ENST00000396603 PIGWQ7Z7B1 504 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 ZNF440Q8IYI8 595 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 ANKS4BQ8N8V4 417 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 POMGNT2Q8NAT1 580 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 FAM168AQ92567 244 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 ANKRD27Q96NW4 1050 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 LRRC37BQ96QE4 947 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 OR11A1Q9GZK7 315 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 MTHFD2LQ9H903 347 aaPredicted RBP14.29□□□□□ -0.12
CLTA-203ENST00000396603 SLC17A5Q9NRA2 495 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 SLC25A37Q9NYZ2 338 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 ARMCX1Q9P291 453 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 OSGIN1Q9UJX0 560 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 FBXO9Q9UK97 447 aaPredicted RBP14.29□□□□□ -0.12
CLTA-203ENST00000396603 AP3M1Q9Y2T2 418 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 TMED7Q9Y3B3 224 aa14.29□□□□□ -0.12
CLTA-203ENST00000396603 TRBV5-3A0A0A0MS03 114 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 LOC100653049A0A140TA62 436 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 OR6C65A6NJZ3 312 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 M0R1B8 84 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 NDUFS8O00217 210 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 SHOX2O60902 331 aaPredicted RBP14.28□□□□□ -0.12
CLTA-203ENST00000396603 BCAS1O75363 584 aaPredicted RBP14.28□□□□□ -0.12
CLTA-203ENST00000396603 KRT34O76011 436 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 MVDP53602 400 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 RUNDC3AQ59EK9 446 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 GCNT6Q5T4J0 391 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 REP15Q6BDI9 236 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 B3GLCTQ6Y288 498 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 RETREG3Q86VR2 466 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 CCDC103Q8IW40 242 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 PEX5LQ8IYB4 626 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 WDR31Q8NA23 367 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 C10orf105Q8TEF2 133 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 ZG16BQ96DA0 208 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 SPATA9Q9BWV2 254 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 SLC38A1Q9H2H9 487 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 ARMC7Q9H6L4 198 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 MYOZ1Q9NP98 299 aaPredicted RBP14.28□□□□□ -0.12
CLTA-203ENST00000396603 A4GALTQ9NPC4 353 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 SLAMF8Q9P0V8 285 aa14.28□□□□□ -0.12
CLTA-203ENST00000396603 A0A0G2JPF8 293 aa14.27□□□□□ -0.13
CLTA-203ENST00000396603 PRAMEF27A3QJZ7 478 aa14.27□□□□□ -0.13
CLTA-203ENST00000396603 CFAP73A6NFT4 308 aa14.27□□□□□ -0.13
CLTA-203ENST00000396603 HNRNPCL2B2RXH8 293 aa14.27□□□□□ -0.13
CLTA-203ENST00000396603 HNRNPCL3B7ZW38 293 aa14.27□□□□□ -0.13
CLTA-203ENST00000396603 HNRNPCL1O60812 293 aaKnown RBP14.27□□□□□ -0.13
CLTA-203ENST00000396603 VAMP5O95183 116 aa14.27□□□□□ -0.13
CLTA-203ENST00000396603 F12P00748 615 aaPredicted RBP14.27□□□□□ -0.13
CLTA-203ENST00000396603 BCHEP06276 602 aa14.27□□□□□ -0.13
CLTA-203ENST00000396603 GPIP06744 558 aa14.27□□□□□ -0.13
CLTA-203ENST00000396603 DBIP07108 87 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms