RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 SNCAP37840 140 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 CMTM2Q8TAZ6 248 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 KHSRPQ92945 711 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL4A3-202ENST00000396578 FAM122AQ96E09 287 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 LRFN5Q96NI6 719 aa13.04□□□□□ -0.32
COL4A3-202ENST00000396578 EXOSC3Q9NQT5 275 aaKnown RBP13.04□□□□□ -0.32
COL4A3-202ENST00000396578 DDAH2O95865 285 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 HTR4Q13639 388 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 TESK1Q15569 626 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 LTB4RQ15722 352 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 C1orf87Q8N0U7 546 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 RGPD2P0DJD1 1756 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 ZNF217O75362 1048 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 DPP4P27487 766 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 TRIM23P36406 574 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 ZMAT1Q5H9K5 638 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 TMEM31Q5JXX7 168 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 SLC51BQ86UW2 128 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 CLEC1AQ8NC01 280 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 LGALS14Q8TCE9 139 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 FOXN4Q96NZ1 517 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 WIF1Q9Y5W5 379 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 SPAG17Q6Q759 2223 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 MROH6A6NGR9 719 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 OR2C1O95371 312 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 HTR2CP28335 458 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 CD68P34810 354 aaPredicted RBP13.03□□□□□ -0.32
COL4A3-202ENST00000396578 GIPRP48546 466 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 CTSL3PQ5NE16 218 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 ZNF425Q6IV72 752 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 DBX2Q6ZNG2 339 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 SIAH1Q8IUQ4 282 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 RNF113BQ8IZP6 322 aaKnown RBP13.03□□□□□ -0.32
COL4A3-202ENST00000396578 MARC2Q969Z3 335 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 VPS25Q9BRG1 176 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 K7EQM0 130 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 STEAP3Q658P3 488 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 LFNGQ8NES3 379 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 SEC22AQ96IW7 307 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 ADOQ96SZ5 270 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 CBLCQ9ULV8 474 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 PHLPP1O60346 1717 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 ARNTLO00327 626 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 OR7C1O76099 320 aaPredicted RBP13.03□□□□□ -0.32
COL4A3-202ENST00000396578 FLI1Q01543 452 aaPredicted RBP13.03□□□□□ -0.32
COL4A3-202ENST00000396578 SIX1Q15475 284 aaPredicted RBP13.03□□□□□ -0.32
COL4A3-202ENST00000396578 RPE65Q16518 533 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 CDONQ4KMG0 1287 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 IL34Q6ZMJ4 242 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 CBLL1Q75N03 491 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 GAB3Q8WWW8 586 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 C14orf79Q96F83 325 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 UBQLN4Q9NRR5 601 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 UFSP2Q9NUQ7 469 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 SLCO3A1Q9UIG8 710 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 CTDSP2O14595 271 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 FCGR2AP12318 317 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 DPPA2Q7Z7J5 298 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 VRK2Q86Y07 508 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 GINS3Q9BRX5 216 aa13.03□□□□□ -0.32
COL4A3-202ENST00000396578 ZCWPW2A0A1B0GU75 182 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 ICMTO60725 284 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 OR8U8P0C7N1 319 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 OR2T7P0C7T2 308 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 FRMPD2BQ6IN97 320 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 OR2T27Q8NH04 317 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 INTS12Q96CB8 462 aaKnown RBP13.02□□□□□ -0.32
COL4A3-202ENST00000396578 AMDHD1Q96NU7 426 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 SLCO5A1Q9H2Y9 848 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 OSGIN2Q9Y236 505 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 DFFBO76075 338 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 UBL3O95164 117 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 MT-ND4LP03901 98 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 THBS1P07996 1170 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 T-ENOLP0DO92 83 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 TPMTP51580 245 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 IKZF1Q13422 519 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 CNEP1R1Q8N9A8 125 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 C8orf33Q9H7E9 229 aaPredicted RBP13.02□□□□□ -0.32
COL4A3-202ENST00000396578 COL14A1Q05707 1796 aaKnown RBP13.02□□□□□ -0.32
COL4A3-202ENST00000396578 ENSAO43768 121 aaKnown RBP13.02□□□□□ -0.32
COL4A3-202ENST00000396578 CLINT1Q14677 625 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 SFXN4Q6P4A7 337 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 TMEM217Q8N7C4 229 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 PKMYT1Q99640 499 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.32
COL4A3-202ENST00000396578 ADAM12O43184 909 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 HTRA4P83105 476 aaPredicted RBP13.02□□□□□ -0.33
COL4A3-202ENST00000396578 EEF1A2Q05639 463 aaKnown RBP13.02□□□□□ -0.33
COL4A3-202ENST00000396578 MDGA2Q7Z553 956 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 SLC22A11Q9NSA0 550 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 SNRPBP14678 240 aaKnown RBP13.02□□□□□ -0.33
COL4A3-202ENST00000396578 CD70P32970 193 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 FAM122BQ7Z309 247 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 CLDN22Q8N7P3 220 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 SELENOIQ9C0D9 397 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 TAF9BQ9HBM6 251 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 GAB2Q9UQC2 676 aa13.02□□□□□ -0.33
COL4A3-202ENST00000396578 GSK3AP49840 483 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms