RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 TMEM185BQ9H7F4 350 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 PLEKHB1Q9UF11 243 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 CHRNA9Q9UGM1 479 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 MRPS7Q9Y2R9 242 aaKnown RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 SLC6A5Q9Y345 797 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 RTTNQ86VV8 2226 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 TRBV11-1A0A0K0K1C0 115 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 A0A1B0GTQ1 180 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 CCDC182A6NF36 153 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 SAGE2PA6NJ88 616 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF354AO60765 605 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 IL1AP01583 271 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 TFP02787 698 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 GP1BBP13224 206 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 NRG3P56975 720 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 OR10A3P58181 314 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 DEFA1P59665 94 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 DEFA3P59666 94 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 EGR4Q05215 589 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 LTBQ06643 244 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 IL18Q14116 193 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 RNASE12Q5GAN4 147 aaKnown RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 PMS2CLQ68D20 193 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 TCEAL6Q6IPX3 200 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 CADM3Q8N126 398 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 OR52N1Q8NH53 320 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 IFI44Q8TCB0 444 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 GPR119Q8TDV5 335 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 TCEAL3Q969E4 200 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 MED11Q9P086 117 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 IKZF2Q9UKS7 526 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 LOC400499M0QZD8 3231 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 ANKRD61A6NGH8 418 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 H3BML4 177 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 OR6A2O95222 327 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 PNMTP11086 282 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 ENDOUP21128 410 aaKnown RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 TGM1P22735 817 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 APEX1P27695 318 aaKnown RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 DCDP81605 110 aaKnown RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF85Q03923 595 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 RPL18Q07020 188 aaKnown RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF74Q16587 644 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 RNLSQ5VYX0 342 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 TUBA3EQ6PEY2 450 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 CCBE1Q6UXH8 406 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 TMEM91Q6ZNR0 172 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 ATG4DQ86TL0 474 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 CCDC190Q86UF4 302 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 CNN2Q99439 309 aaKnown RBP10.14□□□□□ -0.79
TCOF1-203ENST00000394269 SYT4Q9H2B2 425 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 PILRBQ9UKJ0 227 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 R4GN57 208 aa10.14□□□□□ -0.79
TCOF1-203ENST00000394269 DMXL1Q9Y485 3027 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 MN1Q10571 1320 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-203ENST00000394269 TRBV2A0A0J9YWF9 115 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 MASP2O00187 686 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 DCTN6O00399 190 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 PAHP00439 452 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 TFPIP10646 304 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 SLC2A2P11168 524 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-203ENST00000394269 SPI1P17947 270 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 EDNRAP25101 427 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 PSPHP78330 225 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 LGALS3BPQ08380 585 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 QPRTQ15274 297 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 RHBDD2Q6NTF9 364 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 LINC00114Q6XXX2 140 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 DPY19L2P2Q6ZN68 376 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 SLC35F2Q8IXU6 374 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF440Q8IYI8 595 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF485Q8NCK3 441 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 GFM1Q96RP9 751 aaKnown RBP10.13□□□□□ -0.79
TCOF1-203ENST00000394269 NPAS1Q99742 590 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 NXF2Q9GZY0 626 aaKnown RBP10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ERVMER34-1Q9H9K5 563 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 TMEM165Q9HC07 324 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 MMP25Q9NPA2 562 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ACOXLQ9NUZ1 547 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 KLRF1Q9NZS2 232 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 SUSD2Q9UGT4 822 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 NPFFR2Q9Y5X5 522 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 TRDV1A0A1B0GX56 115 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 TMEM72A0PK05 275 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 CCL4P13236 92 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 PRPS1P60891 318 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 VASH1Q7L8A9 365 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-203ENST00000394269 NPEPL1Q8NDH3 523 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 OR5M1Q8NGP8 315 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 TIMP4Q99727 224 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ALG12Q9BV10 488 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 COPS3Q9UNS2 423 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 SRPK3Q9UPE1 567 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 RAD1O60671 282 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ALOX12BO75342 701 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 EVI2BP34910 448 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 INPP5JQ15735 1006 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ZNF181Q2M3W8 571 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 ACSM3Q53FZ2 586 aa10.13□□□□□ -0.79
TCOF1-203ENST00000394269 LINC00299Q6ZSB3 139 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms