RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 ZNF879B4DU55 563 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 F8WDY8 70 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 H0Y8G0 127 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 GOLGA8SH3BPF8 625 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 K7ERQ8 282 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 RRP8O43159 456 aaKnown RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ZW10O43264 779 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 MED7O43513 233 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CBR3O75828 277 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 TNFSF13O75888 250 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 KLHL2O95198 593 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 GNA14O95837 355 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 MT-ATP6P00846 226 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 RPSAP08865 295 aaKnown RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ANXA4P09525 319 aaPredicted RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF735P0CB33 412 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 STAG3L3P0CL85 134 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 H2AFXP16104 143 aaPredicted RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 SERPINA2P20848 420 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PSMA5P28066 241 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CCND2P30279 289 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 HOXA6P31267 233 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 SFNP31947 248 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 MYL6P60660 151 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 UBE2IP63279 158 aaKnown RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 BASP1P80723 227 aaKnown RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 MRPS15P82914 257 aaKnown RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 SPIBQ01892 262 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 TNFRSF17Q02223 184 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 SCGB2A2Q13296 93 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CUL1Q13616 776 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PDIA5Q14554 519 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 NCF4Q15080 339 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CEBPEQ15744 281 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 KPRPQ5T749 579 aaPredicted RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PRAMEF20Q5VT98 475 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 LIPNQ5VXI9 398 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 Q5W150 140 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ERICH5Q6P6B1 374 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 FAM199XQ6PEV8 388 aaPredicted RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CES3Q6UWW8 571 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF836Q6ZNA1 936 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 LANCL3Q6ZV70 420 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 TMCO2Q7Z6W1 182 aaPredicted RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 GRAMD2AQ8IUY3 354 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 NKAPP1Q8N9T2 125 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 STEAP2Q8NFT2 490 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 AKR7LQ8NHP1 331 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 EXOC6Q8TAG9 804 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PAQR8Q8TEZ7 354 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 FBXO32Q969P5 355 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 SGK3Q96BR1 496 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 EEF2KMTQ96G04 330 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ZBED3Q96IU2 234 aaPredicted RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 MS4A14Q96JA4 679 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CEP170P1Q96L14 293 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PSKH2Q96QS6 385 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PLIN2Q99541 437 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ZBTB18Q99592 522 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CITED1Q99966 193 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 NRIP2Q9BQI9 281 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 FEM1AQ9BSK4 669 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 MTG1Q9BT17 334 aaPredicted RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 TPPP3Q9BW30 176 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CRNKL1Q9BZJ0 848 aaKnown RBP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 TMEM117Q9H0C3 514 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 EXO5Q9H790 373 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 SYNDIG1Q9H7V2 258 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 RMND5AQ9H871 391 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 SLC25A22Q9H936 323 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PSTPIP2Q9H939 334 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 LRRC40Q9H9A6 602 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 SPACA1Q9HBV2 294 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 AGPAT3Q9NRZ7 376 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CD300AQ9UGN4 299 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 CRLS1Q9UJA2 301 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 DNPEPQ9ULA0 475 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 NUDCQ9Y266 331 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 STK38LQ9Y2H1 464 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 PHLPP2Q6ZVD8 1323 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 EVC2Q86UK5 1308 aa1.62□□□□□ -2.15
TRAV40-201ENST00000390467 ESYT2A0FGR8 921 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 HEATR9A2RTY3 570 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 GOLGA8OA6NCC3 632 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 FAM74A7A6NL05 159 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 GOLGA8NF8WBI6 632 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 H3BMQ9 156 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 TRDMT1O14717 391 aaKnown RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CLDN3O15551 220 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 ECI2O75521 394 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 SURF6O75683 361 aaKnown RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CIB2O75838 187 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 MFN2O95140 757 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 UQCRFS1P1P0C7P4 283 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CCDC192P0DO97 292 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CRISP2P16562 243 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 ZNF14P17017 642 aaPredicted RBP1.61□□□□□ -2.15
TRAV40-201ENST00000390467 FUT1P19526 365 aa1.61□□□□□ -2.15
TRAV40-201ENST00000390467 CALB2P22676 271 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms