RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ITGB2P05107 769 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 VSIG10L2P0DP72 767 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 GABRR2P28476 465 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 CAPZA1P52907 286 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 PDX1P52945 283 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 H2BFSP57053 126 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 Q499Y3 187 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 METRNLQ641Q3 311 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ANKRD16Q6P6B7 361 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 HAGHLQ6PII5 290 aaPredicted RBP7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF793Q6ZN11 406 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 C17orf107Q6ZR85 190 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ACOT7LQ6ZUV0 252 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 C11orf96Q7Z7L8 435 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF546Q86UE3 836 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 LRRTM4Q86VH4 590 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 PAQR7Q86WK9 346 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 MEX3DQ86XN8 651 aaKnown RBP7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF547Q8IVP9 402 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 CCDC116Q8IYX3 515 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 C12orf45Q8N5I9 185 aaPredicted RBP7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ACOT4Q8N9L9 421 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 BPIFCQ8NFQ6 507 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 OR5AR1Q8NGP9 310 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 OR2L8Q8NGY9 312 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 STOML3Q8TAV4 291 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 GPR148Q8TDV2 347 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 SLC39A7Q92504 469 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 COX14Q96I36 57 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 OR14A2Q96R54 314 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 CDC6Q99741 560 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF426Q9BUY5 554 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 VN1R3Q9BXE9 311 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TRIM2Q9C040 744 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TCF7L1Q9HCS4 588 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 DUSP22Q9NRW4 184 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 KCNE3Q9Y6H6 103 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 A0A087WV62 115 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 A0A1B0GTI1 187 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TCRBV16S1A1N1A0A5B0 115 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 DISC1C4P0D8 188 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 GOSR2O14653 212 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 GNB5O14775 395 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 P2RX6O15547 441 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 FGF16O43320 207 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 RNGTTO60942 597 aaKnown RBP7.54□□□□□ -1.2
PTPRR-203ENST00000378778 NDUFB2O95178 105 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 PLATP00750 562 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 GKN3PP0CG01 181 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 IL9P15248 144 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 CDK2P24941 298 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 MPZP25189 248 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 MAP3K8P41279 467 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 SLC16A1P53985 500 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 LRRC73Q5JTD7 316 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 NKAPLQ5M9Q1 402 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 FAM180BQ6P0A1 224 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ENPP7Q6UWV6 458 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 IL34Q6ZMJ4 242 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 LRRC25Q8N386 305 aaPredicted RBP7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM229BQ8NBD8 167 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 VN1R2Q8NFZ6 395 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 OR4D10Q8NGI6 311 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 OR1J4Q8NGS1 313 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 IRF7Q92985 503 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 ASB16Q96NS5 453 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 PRAP1Q96NZ9 151 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 IL17FQ96PD4 163 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TSNAXQ99598 290 aaKnown RBP7.54□□□□□ -1.2
PTPRR-203ENST00000378778 GFI1Q99684 422 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 SPOCK3Q9BQ16 436 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 C1QTNF6Q9BXI9 259 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 COMMD9Q9P000 198 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 CTSFQ9UBX1 484 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 KLK11Q9UBX7 282 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 CHRNA9Q9UGM1 479 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 CLEC4AQ9UMR7 237 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TNFSF18Q9UNG2 199 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 MOKQ9UQ07 419 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 LRRK1Q38SD2 2015 aa7.54□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM82A0PJX8 343 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 BLOC1S5-TXNDC5H3BN57 136 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 FRS3O43559 492 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 LCMT2O60294 686 aaKnown RBP7.53□□□□□ -1.2
PTPRR-203ENST00000378778 SRPX2O60687 465 aaPredicted RBP7.53□□□□□ -1.2
PTPRR-203ENST00000378778 SYN1P17600 705 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 PVALBP20472 110 aaPredicted RBP7.53□□□□□ -1.2
PTPRR-203ENST00000378778 NOS3P29474 1203 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 MC3RP41968 323 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 GATMP50440 423 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 SLC25A1P53007 311 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 TAS2R19P59542 299 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 GPR85P60893 370 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 CXADRP78310 365 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 PNLIPRP3Q17RR3 467 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 TP53I3Q53FA7 332 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 ASTLQ6HA08 431 aaPredicted RBP7.53□□□□□ -1.2
PTPRR-203ENST00000378778 OR7E24Q6IFN5 339 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 ATRAIDQ6UW56 229 aa7.53□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF813Q6ZN06 617 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms