RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SSX4O60224 188 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 TEAD1P28347 426 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 IRS1P35568 1242 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 SOX18P35713 384 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 PXNP49023 591 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF616Q08AN1 781 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 CHAF1BQ13112 559 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 SMIM4Q8WVI0 70 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 PCNPQ8WW12 178 aaKnown RBP8.12□□□□□ -1.11
PCDH9-202ENST00000377865 DAZLQ92904 295 aaKnown RBP8.12□□□□□ -1.11
PCDH9-202ENST00000377865 SMARCD2Q92925 531 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 WDR34Q96EX3 536 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 HIST1H2AAQ96QV6 131 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 SCPEP1Q9HB40 452 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 KLRF1Q9NZS2 232 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 HRH3Q9Y5N1 445 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 MEIS3P1A6NDR6 274 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 LILRB3O75022 631 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 RAB38P57729 211 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 GLO1Q04760 184 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 DUSP8Q13202 625 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 CBFBQ13951 182 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 SLC25A30Q5SVS4 291 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF585AQ6P3V2 769 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 NDUFAF7Q7L592 441 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 DZANK1Q9NVP4 752 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 POMT2Q9UKY4 750 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 PPIL1Q9Y3C6 166 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 RAB19A4D1S5 217 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ANXA7P20073 488 aaKnown RBP8.12□□□□□ -1.11
PCDH9-202ENST00000377865 CXADRP78310 365 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 B4GALNT1Q00973 533 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ELFN2Q5R3F8 820 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 CCDC71LQ8N9Z2 235 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 OR52I2Q8NH67 350 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 TRAF4Q9BUZ4 470 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-202ENST00000377865 POT1Q9NUX5 634 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 KCND3Q9UK17 655 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 FBXL2Q9UKC9 423 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 SLC22A23A1A5C7 686 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 LRIT2A6NDA9 550 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 HEPACAM2A8MVW5 462 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 IFNA2P01563 188 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 CHRM4P08173 479 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 NAGAP17050 411 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 S100PP25815 95 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 HTR2CP28335 458 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 BCL6P41182 706 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 KIAA1024LP59773 190 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ZNF169Q14929 603 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-202ENST00000377865 TRAPPC6BQ86SZ2 158 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 SGPP2Q8IWX5 399 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ZBTB44Q8NCP5 570 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 PFN4Q8NHR9 129 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 SMIM19Q96E16 107 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ARL5BQ96KC2 179 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 LINC00615Q96LM1 132 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-202ENST00000377865 PTCHD1Q96NR3 888 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 NECTIN4Q96NY8 510 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ZDHHC5Q9C0B5 715 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 POFUT1Q9H488 388 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 C11orf49Q9H6J7 331 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 TAS2R5Q9NYW4 299 aa8.12□□□□□ -1.11
PCDH9-202ENST00000377865 ANKRD12Q6UB98 2062 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 LINC00862A6NCI5 91 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 LATO43561 262 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 FADS1O60427 444 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 SLC2A5P22732 501 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 PTGER1P34995 402 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 CSNK2A1P68400 391 aaPredicted RBP8.11□□□□□ -1.11
PCDH9-202ENST00000377865 DPTQ07507 201 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 ACSM1Q08AH1 577 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 RPE65Q16518 533 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 C2orf27AQ580R0 203 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 PRSS45Q7RTY3 260 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 FAM122BQ7Z309 247 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 OR2L13Q8N349 312 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 ACBD4Q8NC06 268 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 CSNK2A3Q8NEV1 391 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 ARRDC3Q96B67 414 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 SYT3Q9BQG1 590 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 SGIP1Q9BQI5 828 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 UQCC2Q9BRT2 126 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 SLC5A7Q9GZV3 580 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 SLC6A20Q9NP91 592 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 MIA3Q5JRA6 1907 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 RAD51DO75771 328 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 IFNA5P01569 189 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 SEMG1P04279 462 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 GAAP10253 952 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 RAD52P43351 418 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 RFX2P48378 723 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 PCBP3P57721 371 aaKnown RBP8.11□□□□□ -1.11
PCDH9-202ENST00000377865 SPIN3Q5JUX0 258 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 LILRA3Q8N6C8 439 aaPredicted RBP8.11□□□□□ -1.11
PCDH9-202ENST00000377865 MICU1Q9BPX6 476 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 PRDM9Q9NQV7 894 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 COL11A1P12107 1806 aaPredicted RBP8.11□□□□□ -1.11
PCDH9-202ENST00000377865 A0A1B0GWA3 101 aa8.11□□□□□ -1.11
PCDH9-202ENST00000377865 LEUTXA8MZ59 168 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms