RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 IGKV3D-15A0A087WSY6 115 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 A0A1W2PNV4 684 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 ZNF716A6NP11 495 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 LRRN3E7EW58 273 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 M0R082 166 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 PIP5K1CO60331 668 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 RAMP1O60894 148 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 TNFSF13O75888 250 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 KRT36O76013 467 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 VAMP5O95183 116 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 CH25HO95992 272 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 PLGP00747 810 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-201ENST00000374673 NQO1P15559 274 aaKnown RBP13.38□□□□□ -0.27
HSPG2-201ENST00000374673 OPRM1P35372 400 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 ERFP50548 548 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 HMGA2P52926 109 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 SLC16A1P53985 500 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 CTBP2P56545 445 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 PRKCDQ05655 676 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 FOXD4Q12950 439 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-201ENST00000374673 CCNIQ14094 377 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 FGD3Q5JSP0 725 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 PODNL1Q6PEZ8 512 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 ZNF730Q6ZMV8 503 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 MBOAT2Q6ZWT7 520 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 FAM214BQ7L5A3 538 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 MAMDC2Q7Z304 686 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-201ENST00000374673 SLC46A3Q7Z3Q1 461 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 CCDC103Q8IW40 242 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 NRMQ8IXM6 262 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 ZNF417Q8TAU3 575 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 LIPHQ8WWY8 451 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 SLCO4A1Q96BD0 722 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 SGTBQ96EQ0 304 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
HSPG2-201ENST00000374673 ZNF587Q96SQ5 575 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-201ENST00000374673 SF3B5Q9BWJ5 86 aaKnown RBP13.38□□□□□ -0.27
HSPG2-201ENST00000374673 ASPNQ9BXN1 380 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 YY1AP1Q9H869 796 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 CHST11Q9NPF2 352 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 NANSQ9NR45 359 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 C20orf141Q9NUB4 165 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 MRPL39Q9NYK5 338 aaKnown RBP13.38□□□□□ -0.27
HSPG2-201ENST00000374673 KLHL13Q9P2N7 655 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 ZNF229Q9UJW7 825 aa13.38□□□□□ -0.27
HSPG2-201ENST00000374673 TRBV4-1A0A0J9YWV2 114 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 ZNF724A8MTY0 619 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 DVL2O14641 736 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 FKBP6O75344 327 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 OR7A10O76100 309 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 YES1P07947 543 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 ASAH2BP0C7U1 165 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 RNF224P0DH78 156 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 IFI30P13284 250 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 CBLP22681 906 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 AGTR1P30556 359 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 KIR2DL2P43627 348 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-201ENST00000374673 LIMS1P48059 325 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 ACTR3P61158 418 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
HSPG2-201ENST00000374673 SLC17A1Q14916 467 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 POU4F3Q15319 338 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 TMEM225Q6GV28 225 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 OR2T5Q6IEZ7 315 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 TBPL2Q6SJ96 375 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 H1FNTQ75WM6 255 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-201ENST00000374673 RRM2BQ7LG56 351 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 LIX1LQ8IVB5 337 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 TUSC5Q8IXB3 177 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 C10orf53Q8N6V4 93 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 RELL2Q8NC24 303 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-201ENST00000374673 OR6K3Q8NGY3 331 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 OR2T29Q8NH02 315 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 OR5J2Q8NH18 312 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 OR52J3Q8NH60 311 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 BPIFA2Q96DR5 249 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 FANCFQ9NPI8 374 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 C6orf203Q9P0P8 240 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-201ENST00000374673 SEC14L4Q9UDX3 406 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 CLEC4AQ9UMR7 237 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 RASD1Q9Y272 281 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 EMC9Q9Y3B6 208 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 LYVE1Q9Y5Y7 322 aa13.37□□□□□ -0.27
HSPG2-201ENST00000374673 UBR5O95071 2799 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-201ENST00000374673 SH3PXD2BA1X283 911 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 GPR171O14626 319 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 CLDN14O95500 239 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 CST1P01037 141 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 FUT1P19526 365 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 SIRPAP78324 504 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 GK3PQ14409 553 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 SEC23BQ15437 767 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 SLC25A35Q3KQZ1 300 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 TMEM201Q5SNT2 666 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 VWA1Q6PCB0 445 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 CNEP1R1Q8N9A8 125 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 OR4K5Q8NGD3 323 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 OR4C15Q8NGM1 316 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 LILRB4Q8NHJ6 448 aa13.36□□□□□ -0.27
HSPG2-201ENST00000374673 CA5BP1Q8WTZ4 195 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms