RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 NPIPB3Q92617 1050 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 OMA1Q96E52 524 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ARSGQ96EG1 525 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ARHGDIGQ99819 225 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SCNM1Q9BWG6 230 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 RTN4RQ9BZR6 473 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 AMBRA1Q9C0C7 1298 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 KLHL4Q9C0H6 718 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SEMA6AQ9H2E6 1030 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 OPA3Q9H6K4 179 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 MAGIXQ9H6Y5 334 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 MMP25Q9NPA2 562 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 IL1RAPQ9NPH3 570 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 POLE3Q9NRF9 147 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 AGPAT4Q9NRZ5 378 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 VNN3Q9NY84 501 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 SEC14L3Q9UDX4 400 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ZNF443Q9Y2A4 671 aaPredicted RBP3.23□□□□□ -1.89
MCF2-202ENST00000370573 SH3GLB1Q9Y371 365 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 ADAM18Q9Y3Q7 739 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 OR10H1Q9Y4A9 318 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 MED13Q9UHV7 2174 aa3.23□□□□□ -1.89
MCF2-202ENST00000370573 DOCK10Q96BY6 2186 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 NSG1A0A0A6YYJ2 146 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 UBE2QL1A1L167 161 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 C17orf51A8MQB3 221 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ACOX3O15254 700 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 NKX2-8O15522 239 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 FADS1O60427 444 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 REM1O75628 298 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 OR2J2O76002 312 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 HPP00738 406 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 FABP3P05413 133 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 DBIP07108 87 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 LIPCP11150 499 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PRG2P13727 222 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 SELLP14151 372 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 FASP25445 335 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PRKAR1BP31321 381 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 DCTP40126 519 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ZNF136P52737 540 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 IST1P53990 364 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ATP12AP54707 1039 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 RPL15P61313 204 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 HPCAP84074 193 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PPP1R8Q12972 351 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 ADIPOQQ15848 244 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 SNCBQ16143 134 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 EXT1Q16394 746 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 NRF1Q16656 503 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 DECR1Q16698 335 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 NDUFAF6Q330K2 333 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 GAGE13Q4V321 117 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PDZK1Q5T2W1 519 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 FNDC7Q5VTL7 733 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 IGFL4Q6B9Z1 124 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 RGS7BPQ6MZT1 257 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 TBPL2Q6SJ96 375 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 OR6T1Q8NGN1 323 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 VANGL1Q8TAA9 524 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 POC1BQ8TC44 478 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PSMF1Q92530 271 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 CNOT9Q92600 299 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 HGDQ93099 445 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 POP5Q969H6 163 aaKnown RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 NACC2Q96BF6 587 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ZNF524Q96C55 264 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ZNF354BQ96LW1 612 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 MOGAT1Q96PD6 335 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 NEU1Q99519 415 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 SLC29A1Q99808 456 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 SLX1AQ9BQ83 275 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 KLHDC3Q9BQ90 382 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PINK1Q9BXM7 581 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 DEFB126Q9BYW3 111 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 GPN2Q9H9Y4 310 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 ZBTB20Q9HC78 741 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 THSD1Q9NS62 852 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 TUBA8Q9NY65 449 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 DNAJB9Q9UBS3 223 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ANGPTL2Q9UKU9 493 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 NTNG1Q9Y2I2 539 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 ENPP4Q9Y6X5 453 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 DMXL2Q8TDJ6 3036 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 PCNX3Q9H6A9 2034 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 A0A1W2PRX2 142 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 SERINC4A6NH21 518 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 CASQ2O14958 399 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 TLX3O43711 291 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 ICOSLGO75144 302 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 UGT2B11O75310 529 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 LYPD3O95274 346 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 NTN1O95631 604 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 OXSR1O95747 527 aaPredicted RBP3.22□□□□□ -1.89
MCF2-202ENST00000370573 CST1P01037 141 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 LDLRP01130 860 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 THY1P04216 161 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 SERPINA7P05543 415 aa3.22□□□□□ -1.89
MCF2-202ENST00000370573 HNRNPCP07910 306 aaKnown RBP eCLIP3.22□□□□□ -1.89
MCF2-202ENST00000370573 GKN3PP0CG01 181 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms