RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 GABARAPH6UMI1 98 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 I3L1I5 382 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 GNB5O14775 395 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 MAGEB4O15481 346 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 HCRTR1O43613 425 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 SELENOFO60613 162 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 NOS1APO75052 506 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 TPOP07202 933 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 RAB40ALP0C0E4 278 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 CALCBP10092 127 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 MAPK3P27361 379 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 MNDAP41218 407 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 CCR9P51686 369 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 PPP1CAP62136 330 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 EIF2B5Q13144 721 aaKnown RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 COL28A1Q2UY09 1125 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 WBP2NLQ6ICG8 309 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 FAM199XQ6PEV8 388 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 TMEM92Q6UXU6 159 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 SLC16A9Q7RTY1 509 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 LSRQ86X29 649 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 FAM109AQ8N4B1 249 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 OR6K6Q8NGW6 343 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 RAB40AQ8WXH6 277 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 NECTIN4Q96NY8 510 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 DERL3Q96Q80 235 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 MNTQ99583 582 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 TCEAL2Q9H3H9 227 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 C8orf33Q9H7E9 229 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 EXOSC3Q9NQT5 275 aaKnown RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 HCN3Q9P1Z3 774 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 LRIT1Q9P2V4 623 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 ELF5Q9UKW6 265 aaPredicted RBP13.07□□□□□ -0.32
CD48-201ENST00000368045 HIF3AQ9Y2N7 669 aa13.07□□□□□ -0.32
CD48-201ENST00000368045 SPTY2D1-AS1A0A0U1RR47 76 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 ELOA3DA6NLF2 546 aaPredicted RBP13.06□□□□□ -0.32
CD48-201ENST00000368045 ZNF593O00488 134 aaPredicted RBP13.06□□□□□ -0.32
CD48-201ENST00000368045 GPR171O14626 319 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 PIN1P1O15428 100 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 PEX14O75381 377 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 NSA2O95478 260 aaKnown RBP13.06□□□□□ -0.32
CD48-201ENST00000368045 TXNDC12O95881 172 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 WNT1P04628 370 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 CD14P08571 375 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 DPP4P27487 766 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 OR3A3P47888 321 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 PER3P56645 1201 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 HSD17B7P56937 341 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 ERVK-25P63136 954 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 ELOA3BQ3SY89 546 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 EMC4Q5J8M3 183 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 LINC01590Q5TEZ4 76 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 NUP54Q7Z3B4 507 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 FAM220AQ7Z4H9 259 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 SYT9Q86SS6 491 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 JAZF1Q86VZ6 243 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 ELOA3Q8NG57 546 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 OR4C3Q8NH37 302 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 C16orf52Q8NHV5 167 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 GIMAP1Q8WWP7 306 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 PDCD1LG2Q9BQ51 273 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 ALG12Q9BV10 488 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 RBCK1Q9BYM8 510 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 OR10A5Q9H207 317 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 KLHL9Q9P2J3 617 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 SLC23A1Q9UHI7 598 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 SCP2D1Q9UJQ7 156 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 NPTNQ9Y639 398 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 PIAS3Q9Y6X2 628 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 V9GY05 133 aa13.06□□□□□ -0.32
CD48-201ENST00000368045 CHD9Q3L8U1 2897 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 IGKV1D-42A0A075B6H8 117 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 ARPC4-TTLL3A0A0A6YYG9 625 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 TCRBV21S2A2A0A5A6 115 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 EPOPA6NHQ4 379 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 HRKO00198 91 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 KHNYNO15037 678 aaKnown RBP13.05□□□□□ -0.32
CD48-201ENST00000368045 KRT33AO76009 404 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 ZNF432O94892 652 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 TGM6O95932 706 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 MT-ND4P03905 459 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 IFNA16P05015 189 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 GABRG2P18507 467 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 PSMB10P40306 273 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 PBX2P40425 430 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 CCR6P51684 374 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 EPHA4P54764 986 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 SERTAD2Q14140 314 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 DEFB110Q30KQ9 67 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 LEG1Q6P5S2 330 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 LINGO2Q7L985 606 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 ATG4DQ86TL0 474 aaPredicted RBP13.05□□□□□ -0.32
CD48-201ENST00000368045 ZNF615Q8N8J6 731 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 AVL9Q8NBF6 648 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 OR8H1Q8NGG4 311 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 ZNRF4Q8WWF5 429 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 NSMAFQ92636 917 aa13.05□□□□□ -0.32
CD48-201ENST00000368045 RASD2Q96D21 266 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms