RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 TAPBPO15533 448 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 MED7O43513 233 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 SMPD2O60906 423 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 ZNF324O75467 553 aaPredicted RBP2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 DIRAS1O95057 198 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 PNMTP11086 282 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 CNR1P21554 472 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 MMP11P24347 488 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 EFNB2P52799 333 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 ACTA2P62736 377 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 ACTC1P68032 377 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 KLRC3Q07444 240 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 ASPHQ12797 758 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 SMARCB1Q12824 385 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 OXA1LQ15070 435 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 CYTH1Q15438 398 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 PDK4Q16654 411 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 RIPPLY2Q5TAB7 128 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 TMEM225Q6GV28 225 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 FRMPD2BQ6IN97 320 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 LCN12Q6JVE5 192 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 PYHIN1Q6K0P9 492 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 CAMK2N1Q7Z7J9 78 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 H1FOOQ8IZA3 346 aaPredicted RBP2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 TTC5Q8N0Z6 440 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 TMEM123Q8N131 208 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 FNDC5Q8NAU1 212 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 OR4D5Q8NGN0 318 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 TRMT10AQ8TBZ6 339 aaKnown RBP2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 SLC22A8Q8TCC7 542 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 STARD8Q92502 1023 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 PELI1Q96FA3 418 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 ZNF670Q9BS34 389 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 CDC42EP4Q9H3Q1 356 aaKnown RBP2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 ZFP14Q9HCL3 533 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 SLC35D1Q9NTN3 355 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 QPCTLQ9NXS2 382 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 BFARQ9NZS9 450 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 TBX21Q9UL17 535 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 AP1M2Q9Y6Q5 423 aa2.1□□□□□ -2.07
RNU4-1-201ENST00000363925 IGHV3-64DA0A0J9YX35 117 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 TCRBV9S1A1TA0A576 114 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 METTL21EPA6NDL7 271 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 K7EPI3 171 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 XPO1O14980 1071 aaKnown RBP2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 ALDOBP05062 364 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 HEXBP07686 556 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 PCMT1P22061 227 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 PSMA5P28066 241 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 RPL13AP40429 203 aaKnown RBP2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 PTGDSP41222 190 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 UBE2AP49459 152 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 BPIFB3P59826 476 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 CBX1P83916 185 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 NCBP1Q09161 790 aaKnown RBP2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 ZNF763Q0D2J5 394 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 PDIA2Q13087 525 aaKnown RBP2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 KIAA0087Q14695 138 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 ZBED5Q49AG3 693 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 NADK2Q4G0N4 442 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 CTRB2Q6GPI1 263 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 ZNF546Q86UE3 836 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 ZDHHC21Q8IVQ6 265 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 MCOLN3Q8TDD5 553 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 EFHD2Q96C19 240 aaPredicted RBP2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 CXorf40BQ96DE9 158 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 TGM7Q96PF1 710 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 C20orf85Q9H1P6 137 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 NHEJ1Q9H9Q4 299 aaPredicted RBP2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 LIN28AQ9H9Z2 209 aaKnown RBP2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 RAB18Q9NP72 206 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 CCL28Q9NRJ3 127 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 RASD1Q9Y272 281 aa2.09□□□□□ -2.07
RNU4-1-201ENST00000363925 KDRP35968 1356 aa2.09□□□□□ -2.08
RNU4-1-201ENST00000363925 PCM1Q15154 2024 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 PIKFYVEQ9Y2I7 2098 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 CIB4A0PJX0 185 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 C12orf71A8MTZ7 269 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 LOC110117498-PIK3R3F6TDL0 507 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 BTN3A3O00478 584 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 TOM1O60784 492 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 NOL3O60936 208 aaKnown RBP2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 PEX11AO75192 247 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 SUPT3HO75486 399 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 NPR2P20594 1047 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 SLC2A5P22732 501 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 CMA1P23946 247 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 LAP3P28838 519 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 IL12AP29459 219 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 GNA11P29992 359 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 BTCP35070 178 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 MAP3K8P41279 467 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 CD86P42081 329 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 RPS14P62263 151 aaKnown RBP2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 REG3AQ06141 175 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 EIF4EBP1Q13541 118 aaPredicted RBP2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 GANABQ14697 944 aaKnown RBP2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 TMEM183BQ1AE95 376 aa2.08□□□□□ -2.08
RNU4-1-201ENST00000363925 OR2G6Q5TZ20 316 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms