RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 PM20D2Q8IYS1 436 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 GTPBP8Q8N3Z3 284 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 FRMD1Q8N878 549 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 DTX3Q8N9I9 347 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 ADAMTS14Q8WXS8 1223 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 FBXW5Q969U6 566 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 RTL8AQ9BWD3 113 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 MARCH5Q9NX47 278 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 MYH7BA7E2Y1 1941 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 GPR39O43194 453 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 F13BP05160 661 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 MAOAP21397 527 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SPOCK1Q08629 439 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 PGGHGQ32M88 737 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 CTSL3PQ5NE16 218 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 WDR5BQ86VZ2 330 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 CISD2Q8N5K1 135 aaKnown RBP10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SLC37A2Q8TED4 501 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 SLC39A13Q96H72 371 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 FOXQ1Q9C009 403 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 GLTPQ9NZD2 209 aa10.17□□□□□ -0.78
CLIP1-203ENST00000361654 TARM1B6A8C7 271 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 GPRIN2O60269 458 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 RAB4AP20338 218 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 NFYAP23511 347 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-203ENST00000361654 ALDH3B1P43353 468 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 SUB1P53999 127 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLIP1-203ENST00000361654 ADPRHP54922 357 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 KMT5CQ86Y97 462 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 GJC3Q8NFK1 279 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 OR9Q2Q8NGE9 314 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 TRIB1Q96RU8 372 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 KCNIP2Q9NS61 270 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 KAT6AQ92794 2004 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 MON2Q7Z3U7 1717 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 PRAMEF27A3QJZ7 478 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 K7EQM0 130 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 SLC22A5O76082 557 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 TBPP20226 339 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 PSMB10P40306 273 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 AKR1C1Q04828 323 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 ACSM3Q53FZ2 586 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 FRMPD2BQ6IN97 320 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 MAML2Q8IZL2 1156 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-203ENST00000361654 CD1CP29017 333 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 GTDC1Q4AE62 458 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 AARDQ4LEZ3 155 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 BCL7AQ4VC05 210 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 CHDHQ8NE62 594 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-203ENST00000361654 DCUN1D4Q92564 292 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 ZNF582Q96NG8 517 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-203ENST00000361654 TAAR9Q96RI9 348 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 NMNAT2Q9BZQ4 307 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 A0A0U1RQS6 177 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 LRP5LA4QPB2 252 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 ZNF593O00488 134 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-203ENST00000361654 PTGS2P35354 604 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 GMPRP36959 345 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 GABREP78334 506 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 P2RY14Q15391 338 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 TMEM236Q5W0B7 351 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 SLC35D2Q76EJ3 337 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 ARRDC2Q8TBH0 407 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 LIPHQ8WWY8 451 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 MIB2Q96AX9 1013 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 ATF6BQ99941 703 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 LTB4R2Q9NPC1 389 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 USP22Q9UPT9 525 aa10.16□□□□□ -0.78
CLIP1-203ENST00000361654 PHRF1Q9P1Y6 1649 aaKnown RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 BET1O15155 118 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 P2RX6O15547 441 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 POU2F2P09086 479 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 NFYBP25208 207 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 HLCSP50747 726 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 PRAMEF9Q5VWM5 478 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 OR4D6Q8NGJ1 314 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 MUL1Q969V5 352 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 ANKRD9Q96BM1 317 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 LANCL2Q9NS86 450 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 EHFQ9NZC4 300 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 A0A1B0GV50 99 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 H0YIV9 168 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 SLC2A1P11166 492 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 OPRD1P41143 372 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 APOBEC1P41238 236 aaKnown RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 IDH3GP51553 393 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 GRB2P62993 217 aaKnown RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 SRPXP78539 464 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 HOXC5Q00444 222 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 SEMA3BQ13214 749 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 COX15Q7KZN9 410 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 SYNPRQ8TBG9 265 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 MAELQ96JY0 434 aaKnown RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 MBOAT4Q96T53 435 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 PCED1AQ9H1Q7 454 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 GSTO2Q9H4Y5 243 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 PPT2Q9UMR5 302 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 MYH6P13533 1939 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 LRRC37A3O60309 1634 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms