RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 NPRL2Q8WTW4 380 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 ESAMQ96AP7 390 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLC41A3Q96GZ6 507 aa5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 MRPL57Q9BQC6 102 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 AURKAIP1Q9NWT8 199 aaPredicted RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 CPSF2Q9P2I0 782 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 PURGQ9UJV8 347 aaKnown RBP5.05□□□□□ -1.6
CDC42SE2-201ENST00000360515 PRR14LQ5THK1 2151 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 PLCE1Q9P212 2302 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 CIB4A0PJX0 185 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 ENTPD5O75356 428 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 TSPAN15O95858 294 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 RPL3P39023 403 aaKnown RBP5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 HFEQ30201 348 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 TMEM107Q6UX40 140 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 GDPGP1Q6ZNW5 385 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 MYPOPQ86VE0 399 aaPredicted RBP5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 C20orf196Q8IYI0 205 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 LINC01006Q8NI28 216 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 THOC1Q96FV9 657 aaKnown RBP5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 SH3GL3Q99963 347 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 OXSMQ9NWU1 459 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 KCNE5Q9UJ90 142 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 A0A087WUV0 522 aaPredicted RBP5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 NCF1BA6NI72 391 aaPredicted RBP5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 NCF1CA8MVU1 366 aaPredicted RBP5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF587BE7ETH6 402 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 SULT2B1O00204 365 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 ATP8B1O43520 1251 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZFPL1O95159 310 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 NCF1P14598 390 aaPredicted RBP5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 STX2P32856 288 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 POLR2HP52434 150 aaKnown RBP5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 IL1RL1Q01638 556 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 CAV1Q03135 178 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 CDK5R2Q13319 367 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF440Q8IYI8 595 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF519Q8TB69 540 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 TRIM5Q9C035 493 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 ELOVL6Q9H5J4 265 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 NOX3Q9HBY0 568 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 WIPI2Q9Y4P8 454 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 GMEB1Q9Y692 573 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 CLDN25C9JDP6 229 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 P2RY10O00398 339 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 CRHR1P34998 444 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 MMP15P51511 669 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF678Q5SXM1 525 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 DCST2Q5T1A1 773 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 LIAT1Q6ZQX7 453 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 C17orf107Q6ZR85 190 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 MFSD8Q8NHS3 518 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 DDIT4LQ96D03 193 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 APIPQ96GX9 242 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 CAB39LQ9H9S4 337 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLC12A4Q9UP95 1085 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 CHMP2BQ9UQN3 213 aa5.04□□□□□ -1.6
CDC42SE2-201ENST00000360515 IGHV2-70DA0A0C4DH43 119 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 AGAP5A6NIR3 686 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ANKRD65E5RJM6 399 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 RNASEK-C17orf49H0YIS7 233 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 TRAPPC2LH3BP13 241 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 UBOX5O94941 541 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ESRRBO95718 433 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 GBAP04062 536 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 C2P06681 752 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZFP36P26651 326 aaKnown RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 SERPINB8P50452 374 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 DNAJB13P59910 316 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF572Q7Z3I7 529 aaPredicted RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 SPATA19Q7Z5L4 167 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 SLC16A11Q8NCK7 471 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 OR5P2Q8WZ92 322 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 PIK3R3Q92569 461 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 SIGLEC11Q96RL6 698 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 SDF2Q99470 211 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 REEP4Q9H6H4 257 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ANKRA2Q9H9E1 313 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 FARSBQ9NSD9 589 aaKnown RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 DDX18Q9NVP1 670 aaKnown RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 HUWE1Q7Z6Z7 4374 aaKnown RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF503-AS2A6NEH8 195 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZNF99A8MXY4 864 aaPredicted RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 PDPK1O15530 556 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 BANF1O75531 89 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 UGT2B17O75795 530 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 UBL3O95164 117 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 NEFHP12036 1026 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 MMP9P14780 707 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 IMPDH1P20839 514 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 HIST3H3Q16695 136 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 PFKFB4Q16877 469 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 UNC50Q53HI1 259 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 RIMKLAQ8IXN7 391 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 MMGT1Q8N4V1 131 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 CPEB3Q8NE35 698 aaKnown RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 RAB1CQ92928 201 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 TMEM54Q969K7 222 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 FAM120BQ96EK7 910 aaKnown RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ELMOD3Q96FG2 381 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms