RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 CDC40O60508 579 aaKnown RBP eCLIP6.29□□□□□ -1.4
RTN4-203ENST00000357376 CYB5AP00167 134 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 AMY2AP04746 511 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 EPXP11678 715 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 LTBQ06643 244 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 Q5BKY6 102 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 ZBTB37Q5TC79 503 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 DUSP18Q8NEJ0 188 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 DVL3Q92997 716 aaPredicted RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 TGM7Q96PF1 710 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 ADOQ96SZ5 270 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 ZMAT3Q9HA38 289 aaKnown RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 DHDHQ9UQ10 334 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 C4orf51C9J302 202 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 GPR171O14626 319 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 KCNJ13O60928 360 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 LILRB3O75022 631 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 WNT1P04628 370 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 THBS1P07996 1170 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 GIMD1P0DJR0 217 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 TBXA2RP21731 343 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 HNRNPA2B1P22626 353 aaKnown RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 SLC6A1P30531 599 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 EMDP50402 254 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 SRSF5Q13243 272 aaKnown RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 BEX5Q5H9J7 111 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 ZCCHC12Q6PEW1 402 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 KLHL24Q6TFL4 600 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 BTN2A1Q7KYR7 527 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 FOXRED2Q8IWF2 684 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 ZNF101Q8IZC7 436 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 BEST3Q8N1M1 668 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 SENP5Q96HI0 755 aaPredicted RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 COX14Q96I36 57 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 C7orf50Q9BRJ6 194 aaKnown RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 TEX101Q9BY14 249 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 CCDC86Q9H6F5 360 aaKnown RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 ERVMER34-1Q9H9K5 563 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 DUSP22Q9NRW4 184 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 TAS2R3Q9NYW6 316 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 CYP8B1Q9UNU6 501 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 SIGLEC7Q9Y286 467 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 OR14I1A6ND48 311 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 ZNF593O00488 134 aaPredicted RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 SPINT1O43278 529 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 PRAMEF2O60811 474 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 PRAF2O60831 178 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 CTSVO60911 334 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 HTR2AP28223 471 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 PRSS3P35030 304 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 RAD52P43351 418 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 TSFMP43897 325 aaKnown RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 PER3P56645 1201 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 PRPS1P60891 318 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 CDK5R1Q15078 307 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 HEPHL1Q6MZM0 1159 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 C19orf48Q6RUI8 117 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 TEX261Q6UWH6 196 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 TTLL10Q6ZVT0 673 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 VN1R4Q7Z5H5 301 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 SLC35F3Q8IY50 421 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 AVL9Q8NBF6 648 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 OR51D1Q8NGF3 324 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 GPR148Q8TDV2 347 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 DUSP19Q8WTR2 217 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 SMIM19Q96E16 107 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 SFXN2Q96NB2 322 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 MYADMQ96S97 322 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 COPS7AQ9UBW8 275 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 ING1Q9UK53 422 aaPredicted RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 MRPS2Q9Y399 296 aaKnown RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
RTN4-203ENST00000357376 ZNF337Q9Y3M9 751 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 U3KQ87 197 aa6.29□□□□□ -1.4
RTN4-203ENST00000357376 A0A0J9YY10 115 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 F5H5P2 479 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 EGFP01133 1207 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 MAOAP21397 527 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 DCTDP32321 178 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 PBX2P40425 430 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 FRKP42685 505 aaPredicted RBP6.28□□□□□ -1.4
RTN4-203ENST00000357376 CCR9P51686 369 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 ADPRHP54922 357 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 FXYD6P3P58550 94 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 BDH1Q02338 343 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 NFATC4Q14934 902 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 RAB11BQ15907 218 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 ST3GAL2Q16842 350 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 ARHGAP40Q5TG30 622 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 HACD4Q5VWC8 232 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 LIPNQ5VXI9 398 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 OR7E24Q6IFN5 339 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 PTP4A1Q93096 173 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 PELI1Q96FA3 418 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 S100A13Q99584 98 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SLC6A7Q99884 636 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 MFFQ9GZY8 342 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SYT4Q9H2B2 425 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 SEC61A2Q9H9S3 476 aa6.28□□□□□ -1.4
RTN4-203ENST00000357376 FBXL2Q9UKC9 423 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms