RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 COMMD3Q9UBI1 195 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 ICAM5Q9UMF0 924 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 FRG2CA6NGY1 282 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 CRYBB2P43320 205 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 SLC26A5P58743 744 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.58□□□□□ -0.4
LSS-201ENST00000356396 HNRNPA0Q13151 305 aaKnown RBP12.58□□□□□ -0.4
LSS-201ENST00000356396 ALG10Q5BKT4 473 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 ATG4DQ86TL0 474 aaPredicted RBP12.58□□□□□ -0.4
LSS-201ENST00000356396 ZNF527Q8NB42 609 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 DEFB124Q8NES8 71 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 NSMAFQ92636 917 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 C5orf34Q96MH7 638 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 ACOXLQ9NUZ1 547 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 CHCHD3Q9NX63 227 aaKnown RBP12.58□□□□□ -0.4
LSS-201ENST00000356396 PLA2G3Q9NZ20 509 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 GNG8Q9UK08 70 aa12.58□□□□□ -0.4
LSS-201ENST00000356396 IGKV1D-43A0A0B4J1Z2 117 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 RIIAD1A6NNX1 92 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
LSS-201ENST00000356396 PAHP00439 452 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 SLC2A2P11168 524 aaPredicted RBP12.57□□□□□ -0.4
LSS-201ENST00000356396 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 FNDC7Q5VTL7 733 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 ZNF613Q6PF04 617 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 ESPNLQ6ZVH7 1005 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 ADGRG3Q86Y34 549 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 NAT6Q93015 286 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 TUBA1CQ9BQE3 449 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 NUAK2Q9H093 628 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 GALNT8Q9NY28 637 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 MYOTQ9UBF9 498 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 ARRDC5A6NEK1 342 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 SLC25A12O75746 678 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 OR8G3PP0DMU2 310 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 SOX2P48431 317 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 DPY19L4Q7Z388 723 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 ZNF550Q7Z398 422 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 ZBTB44Q8NCP5 570 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 ZNF420Q8TAQ5 688 aaPredicted RBP12.57□□□□□ -0.4
LSS-201ENST00000356396 MMP25Q9NPA2 562 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 GPN3Q9UHW5 284 aaPredicted RBP12.57□□□□□ -0.4
LSS-201ENST00000356396 MMACHCQ9Y4U1 282 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 PCDHGB1Q9Y5G3 927 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 TRIM3O75382 744 aaPredicted RBP12.57□□□□□ -0.4
LSS-201ENST00000356396 PRKAR1AP10644 381 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 CD59P13987 128 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 GRK6P43250 576 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 STARP49675 285 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 FAM198BQ6UWH4 519 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 LINC00696Q6ZRV3 163 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 NANOGNBQ7Z5D8 188 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 NR2C2APQ86WQ0 139 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 LINC00346Q8IVM7 164 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 OR14A16Q8NHC5 309 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 GPN2Q9H9Y4 310 aaPredicted RBP12.57□□□□□ -0.4
LSS-201ENST00000356396 PARD6AQ9NPB6 346 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 TIGARQ9NQ88 270 aa12.57□□□□□ -0.4
LSS-201ENST00000356396 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
LSS-201ENST00000356396 TMED7-TICAM2A0A0A6YYA0 188 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 SAGE2PA6NJ88 616 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 HCN1O60741 890 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 SYPP08247 313 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 WNT4P56705 351 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 OC90Q02509 493 aaPredicted RBP12.56□□□□□ -0.4
LSS-201ENST00000356396 Q0VFX4 171 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 DCTN2Q13561 401 aaKnown RBP12.56□□□□□ -0.4
LSS-201ENST00000356396 ZNF74Q16587 644 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 VASNQ6EMK4 673 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 RTL4Q6ZR62 310 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 TMPRSS11FQ6ZWK6 438 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 VASH2Q86V25 355 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 OR6V1Q8N148 313 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 MVB12AQ96EY5 273 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 SH3GL3Q99963 347 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 ZNF649Q9BS31 505 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 SLC25A18Q9H1K4 315 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 MYEF2Q9P2K5 600 aaKnown RBP12.56□□□□□ -0.4
LSS-201ENST00000356396 SRPK3Q9UPE1 567 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 TMED7Q9Y3B3 224 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 TLN1Q9Y490 2541 aaKnown RBP12.56□□□□□ -0.4
LSS-201ENST00000356396 NUP210LQ5VU65 1888 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 HOXD12P35452 270 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 CLDN12P56749 244 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 INSM1Q01101 510 aaPredicted RBP12.56□□□□□ -0.4
LSS-201ENST00000356396 MESTQ5EB52 335 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 WBP2NLQ6ICG8 309 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 SPINK14Q6IE38 97 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 MEPCEQ7L2J0 689 aaKnown RBP12.56□□□□□ -0.4
LSS-201ENST00000356396 LNX2Q8N448 690 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 PROKR2Q8NFJ6 384 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 OR11G2Q8NGC1 345 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 OR10AC1Q8NH08 325 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 GCDHQ92947 438 aaPredicted RBP12.56□□□□□ -0.4
LSS-201ENST00000356396 TSPAN32Q96QS1 320 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 CMKLR1Q99788 373 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 MND1Q9BWT6 205 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 CDCA4Q9BXL8 241 aa12.56□□□□□ -0.4
LSS-201ENST00000356396 TAS2R10Q9NYW0 307 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms