RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 KRT33AO76009 404 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 LCN1P31025 176 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 AP3S2P59780 193 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 NANOS3P60323 173 aaKnown RBP22.46■■□□□ 1.19
CPNE1-202ENST00000352393 ILF3Q12906 894 aaKnown RBP eCLIP22.46■■□□□ 1.197e-7■■■■■ 35.6
CPNE1-202ENST00000352393 ITPRIPL2Q3MIP1 535 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 MANEAQ5SRI9 462 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 SLC38A6Q8IZM9 456 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 CSNK1A1LQ8N752 337 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 NPDC1Q9NQX5 325 aaPredicted RBP22.46■■□□□ 1.19
CPNE1-202ENST00000352393 NUP50Q9UKX7 468 aa22.46■■□□□ 1.19
CPNE1-202ENST00000352393 LRP4O75096 1905 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 PRR32B1ATL7 298 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 IDSB3KWA1 339 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 RASGRP1O95267 797 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 RPL4P36578 427 aaKnown RBP22.45■■□□□ 1.18
CPNE1-202ENST00000352393 PTH2RP49190 550 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 BLVRAP53004 296 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 ISXQ2M1V0 245 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 ZNF684Q5T5D7 378 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 METTL11BQ5VVY1 283 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 OLFML2AQ68BL7 652 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 COMMD7Q86VX2 200 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 CEP76Q8TAP6 659 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 LRRC20Q8TCA0 184 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 OR10H2O60403 315 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 GDI1P31150 447 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 HOXD11P31277 338 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-202ENST00000352393 TNFRSF4P43489 277 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 ZNHIT3Q15649 155 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-202ENST00000352393 GRK1Q15835 563 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 FCRLAQ7L513 359 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 FTMTQ8N4E7 242 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 OR6K6Q8NGW6 343 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 HERVK_113Q902F9 699 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 GABRG3Q99928 467 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 OR10A4Q9H209 315 aa22.45■■□□□ 1.18
CPNE1-202ENST00000352393 A0A087WUJ7 227 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 FOXS1O43638 330 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 SULT1B1O43704 296 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 CFDP00746 253 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-202ENST00000352393 COL9A1P20849 921 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 RPS4XP62701 263 aaKnown RBP22.44■■□□□ 1.18
CPNE1-202ENST00000352393 IL10RAQ13651 578 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 GXYLT1Q4G148 440 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 SLC35F3Q8IY50 421 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 RASD2Q96D21 266 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 LMAN2LQ9H0V9 348 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 LIN7BQ9HAP6 207 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 FOXJ3Q9UPW0 622 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 NUP210LQ5VU65 1888 aa22.44■■□□□ 1.18
CPNE1-202ENST00000352393 C2orf74A8MZ97 194 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 I3L521 148 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 RDH16O75452 317 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 PPM1BO75688 479 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 ZFPL1O95159 310 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 APBB3O95704 486 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 NTSR1P30989 418 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 RPL6Q02878 288 aaKnown RBP22.43■■□□□ 1.18
CPNE1-202ENST00000352393 GPM6BQ13491 265 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 WDR45BQ5MNZ6 344 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 LINC01590Q5TEZ4 76 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 STPG1Q5TH74 334 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 PWWP2BQ6NUJ5 590 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 ZNF433Q8N7K0 673 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-202ENST00000352393 BMFQ96LC9 184 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 VSTM2LQ96N03 204 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 CDCP1Q9H5V8 836 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 FBXL3Q9UKT7 428 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 V9GY05 133 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 ANKRD20A5PA0PJZ0 165 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 ARPC1BO15143 372 aaKnown RBP22.43■■□□□ 1.18
CPNE1-202ENST00000352393 TOXO94900 526 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 MAGEB1P43366 347 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 DHODHQ02127 395 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 NDUFAF6Q330K2 333 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 NPSR1Q6W5P4 371 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 OR6V1Q8N148 313 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 UXS1Q8NBZ7 420 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 FCAMRQ8WWV6 532 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 OR5V1Q9UGF6 321 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 DTX4Q9Y2E6 619 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 ZNF337Q9Y3M9 751 aa22.43■■□□□ 1.18
CPNE1-202ENST00000352393 A0A0J9YY10 115 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 CIB4A0PJX0 185 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 OR7A10O76100 309 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 GLCEO94923 617 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 CLDN12P56749 244 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 FBXO46Q6PJ61 603 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-202ENST00000352393 APOOLQ6UXV4 268 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 SERPINA12Q8IW75 414 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 GPX7Q96SL4 187 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-202ENST00000352393 STARD5Q9NSY2 213 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 WSB2Q9NYS7 404 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-202ENST00000352393 KLK11Q9UBX7 282 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 KIAA0100Q14667 2235 aaKnown RBP22.42■■□□□ 1.18
CPNE1-202ENST00000352393 A0A1W2PQF6 199 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 EFCAB7A8K855 629 aa22.42■■□□□ 1.18
CPNE1-202ENST00000352393 KHDRBS3O75525 346 aaKnown RBP22.42■■□□□ 1.18
CPNE1-202ENST00000352393 CALCBP10092 127 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms