RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TSPAN19P0C672 248 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 OSMP13725 252 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 GSTM3P21266 225 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 AQP2P41181 271 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 FASNP49327 2511 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 P2RY4P51582 365 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 RPS4XP62701 263 aaKnown RBP17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 COX10Q12887 443 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 SLC36A3Q495N2 470 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 ZBED5Q49AG3 693 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 HBMQ6B0K9 141 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 ESPNLQ6ZVH7 1005 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 MAMDC2Q7Z304 686 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 OAFQ86UD1 273 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 PARP8Q8N3A8 854 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 TMEM99Q8N816 258 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 OSTF1Q92882 214 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 WBP1Q96G27 269 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 SAMD8Q96LT4 415 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 TAPBPLQ9BX59 468 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 RIBC2Q9H4K1 309 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 C8orf4Q9NR00 106 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 ALKBH4Q9NXW9 302 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 SMPD3Q9NY59 655 aaPredicted RBP17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 IL20RAQ9UHF4 553 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 TRAPPC4Q9Y296 219 aa17.02■□□□□ 0.32
CHMP4A-201ENST00000347519 IGHV3-15A0A0B4J1V0 119 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 EIF4E1BA6NMX2 242 aaKnown RBP17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 NPIPA2E9PIF3 369 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 E9PQ18 207 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 NPIPA3F8WFD2 350 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 UQCRC1P31930 480 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 EIF1AXP47813 144 aaKnown RBP17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 SLC9A3P48764 834 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 IGFN1Q86VF2 1251 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 KDM8Q8N371 416 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 LRRC75AQ8NAA5 344 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 OR5J2Q8NH18 312 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 FANK1Q8TC84 345 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 DNAJC9Q8WXX5 260 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 UCN2Q96RP3 112 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 GABARAPL3Q9BY60 117 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 VCX3BQ9H321 246 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 OR52D1Q9H346 318 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 MRPL39Q9NYK5 338 aaKnown RBP17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 TAS2R5Q9NYW4 299 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 CAMK2AQ9UQM7 478 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 HIF3AQ9Y2N7 669 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 CDH10Q9Y6N8 788 aa17.02■□□□□ 0.31
CHMP4A-201ENST00000347519 SVILO95425 2214 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 GTF3C1Q12789 2109 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 MS4A18H0YCH9 400 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 BLOC1S5-TXNDC5H3BN57 136 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 PLPP3O14495 311 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 CPN1P15169 458 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 POU1F1P28069 291 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 CRISP1P54107 249 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 CARD18P57730 90 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 SLC35A1P78382 337 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 RPL18Q07020 188 aaKnown RBP17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 MS4A18Q3C1V0 323 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 TMEM236Q5W0B7 351 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 NANOGNBQ7Z5D8 188 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 CCDC103Q8IW40 242 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 MEIOBQ8N635 442 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 IQCF1Q8N6M8 205 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 OR4Q3Q8NH05 313 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 SLX1AQ9BQ83 275 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 ASPNQ9BXN1 380 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 CHST11Q9NPF2 352 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 IL20Q9NYY1 176 aa17.01■□□□□ 0.31
CHMP4A-201ENST00000347519 KDM4EB2RXH2 506 aaPredicted RBP17■□□□□ 0.31
CHMP4A-201ENST00000347519 SMAD9O15198 467 aaKnown RBP17■□□□□ 0.31
CHMP4A-201ENST00000347519 HIST1H2ABP04908 130 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 ENPP1P22413 925 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 AGFG1P52594 562 aaKnown RBP17■□□□□ 0.31
CHMP4A-201ENST00000347519 RAD23AP54725 363 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 RAC3P60763 192 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 H3F3AP84243 136 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 NPRL3Q12980 569 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 PMS2P3Q13401 168 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 SGCBQ16585 318 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 RFX4Q33E94 735 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 CLEC12AQ5QGZ9 265 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 SMARCD3Q6STE5 483 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 H1FNTQ75WM6 255 aaPredicted RBP17■□□□□ 0.31
CHMP4A-201ENST00000347519 HIST3H2AQ7L7L0 130 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 CLDN22Q8N7P3 220 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 OR5M9Q8NGP3 310 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 ROBO4Q8WZ75 1007 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 HIST1H2ACQ93077 130 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 TUBA1CQ9BQE3 449 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 PRDM14Q9GZV8 571 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 VCXQ9H320 206 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 ORC6Q9Y5N6 252 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 CORINQ9Y5Q5 1042 aa17■□□□□ 0.31
CHMP4A-201ENST00000347519 SMG1Q96Q15 3661 aaKnown RBP17■□□□□ 0.31
CHMP4A-201ENST00000347519 PRRC2CQ9Y520 2896 aaKnown RBP16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 TTLL8A6PVC2 850 aa16.99■□□□□ 0.31
CHMP4A-201ENST00000347519 MCIDASD6RGH6 385 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms