RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ARHGAP11AQ6P4F7 1023 aa12.28□□□□□ -0.44
CDC42-202ENST00000344548 RPS19BP1Q86WX3 136 aaKnown RBP12.28□□□□□ -0.44
CDC42-202ENST00000344548 KDM8Q8N371 416 aa12.28□□□□□ -0.44
CDC42-202ENST00000344548 FAM98AQ8NCA5 519 aaKnown RBP12.28□□□□□ -0.44
CDC42-202ENST00000344548 POC1BQ8TC44 478 aa12.28□□□□□ -0.44
CDC42-202ENST00000344548 SLC39A7Q92504 469 aa12.28□□□□□ -0.44
CDC42-202ENST00000344548 ERVK13-1Q9NX77 482 aa12.28□□□□□ -0.44
CDC42-202ENST00000344548 PPP4R1LQ9P1A2 415 aa12.28□□□□□ -0.44
CDC42-202ENST00000344548 C12orf71A8MTZ7 269 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 H7C1C5 153 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 DCTN6O00399 190 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 ARPC3O15145 178 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 ZNF3P17036 446 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 TMED10P49755 219 aaKnown RBP12.27□□□□□ -0.44
CDC42-202ENST00000344548 LCN6P62502 163 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 C1orf140Q5VVS0 124 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 MISPQ8IVT2 679 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 TBC1D15Q8TC07 691 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 ZMYND19Q96E35 227 aaPredicted RBP12.27□□□□□ -0.44
CDC42-202ENST00000344548 GPX7Q96SL4 187 aaPredicted RBP12.27□□□□□ -0.44
CDC42-202ENST00000344548 ADGRL4Q9HBW9 690 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 P4HTMQ9NXG6 502 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 TNFRSF10DQ9UBN6 386 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 IL17BQ9UHF5 180 aa12.27□□□□□ -0.44
CDC42-202ENST00000344548 TRAV36DV7A0A075B6V5 113 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 SNTNA6NMZ2 147 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 C11orf98E9PRG8 122 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 MAGEB4O15481 346 aaPredicted RBP12.27□□□□□ -0.45
CDC42-202ENST00000344548 BCL10O95999 233 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 RAB40ALP0C0E4 278 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 CDK4P11802 303 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 ENDOUP21128 410 aaKnown RBP12.27□□□□□ -0.45
CDC42-202ENST00000344548 ATP6V1E1P36543 226 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 DLSTP36957 453 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 MLF1P58340 268 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 PRPS1P60891 318 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 DNASE1L3Q13609 305 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 SSPNQ14714 243 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 SLC6A19Q695T7 634 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 SSX6Q7RTT6 188 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 GID4Q8IVV7 300 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 WDFY1Q8IWB7 410 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 PHC2Q8IXK0 858 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 OR2M3Q8NG83 312 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 DYNC2LI1Q8TCX1 351 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 TSPAN32Q96QS1 320 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 UBL7Q96S82 380 aaPredicted RBP12.27□□□□□ -0.45
CDC42-202ENST00000344548 TTTY10Q9BZA0 68 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 BAIAP2Q9UQB8 552 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 CUL9Q8IWT3 2517 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 CFAP47Q6ZTR5 3102 aa12.27□□□□□ -0.45
CDC42-202ENST00000344548 MED13Q9UHV7 2174 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 TMEM129A0AVI4 362 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 A8MVM7 634 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 FTCDNL1E5RQL4 147 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 CCRL2O00421 344 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 SLC25A12O75746 678 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 F10P00742 488 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 PLGP00747 810 aaPredicted RBP12.26□□□□□ -0.45
CDC42-202ENST00000344548 TFP02787 698 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 CD14P08571 375 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 MYL12AP19105 171 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 NUBP1P53384 320 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 WNT4P56705 351 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 PLPPR5Q32ZL2 321 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 MESTQ5EB52 335 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 NANOGNBQ7Z5D8 188 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 GLRX5Q86SX6 157 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 LSM14AQ8ND56 463 aaKnown RBP12.26□□□□□ -0.45
CDC42-202ENST00000344548 PSMF1Q92530 271 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 TMEM203Q969S6 136 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 LRFN3Q9BTN0 628 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 COL25A1Q9BXS0 654 aaPredicted RBP12.26□□□□□ -0.45
CDC42-202ENST00000344548 RACGAP1Q9H0H5 632 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 TMEM185BQ9H7F4 350 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 FKRPQ9H9S5 495 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 ZNF229Q9UJW7 825 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 H3BML4 177 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 SLC22A1O15245 554 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 SBK2P0C263 348 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 FTH1P19P0C7X4 201 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 HLA-DOBP13765 273 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 GRPRP30550 384 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 TGIF1Q15583 401 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 FAM69AQ5T7M9 428 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 OTPQ5XKR4 325 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 SLC15A4Q8N697 577 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 NLGN4YQ8NFZ3 816 aaPredicted RBP12.26□□□□□ -0.45
CDC42-202ENST00000344548 SPRYD4Q8WW59 207 aaPredicted RBP12.26□□□□□ -0.45
CDC42-202ENST00000344548 ASB15Q8WXK1 588 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 GNRHR2Q96P88 292 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 ARHGAP9Q9BRR9 750 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 NMNAT2Q9BZQ4 307 aa12.26□□□□□ -0.45
CDC42-202ENST00000344548 SPIN1Q9Y657 262 aaPredicted RBP12.26□□□□□ -0.45
CDC42-202ENST00000344548 GVINP1Q7Z2Y8 2422 aa12.25□□□□□ -0.45
CDC42-202ENST00000344548 IGLV3-32A0A0A0MS00 114 aa12.25□□□□□ -0.45
CDC42-202ENST00000344548 A0A0G2JMM0 328 aa12.25□□□□□ -0.45
CDC42-202ENST00000344548 A0A1W2PPB8 328 aa12.25□□□□□ -0.45
CDC42-202ENST00000344548 A0A1W2PRS3 328 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms