RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 MORN1Q5T089 497 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 GLDNQ6ZMI3 551 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF765Q7L2R6 523 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 MEX3DQ86XN8 651 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 NLGN4XQ8N0W4 816 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CHST14Q8NCH0 376 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RNF128Q8TEB7 428 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 DAZLQ92904 295 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 DDIT4LQ96D03 193 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLC25A31Q9H0C2 315 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SMG9Q9H0W8 520 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 IL21RQ9HBE5 538 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CMC2Q9NRP2 79 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 EXOGQ9Y2C4 368 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 HIF3AQ9Y2N7 669 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 IER3IP1Q9Y5U9 82 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 MEIKINA0A087WXM9 373 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TXNL1O43396 289 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 XRCC3O43542 346 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 C5AR1P21730 350 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 WASP42768 502 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 LIM2P55344 173 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SHC2P98077 582 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ACSM5Q6NUN0 579 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 PAPD4Q6PIY7 484 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CD300LDQ6UXZ3 194 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 WDR88Q6ZMY6 472 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF283Q8N7M2 679 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 LHFPL5Q8TAF8 219 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 AUTS2Q8WXX7 1259 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 NECTIN4Q96NY8 510 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RTP3Q9BQQ7 232 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SEC22CQ9BRL7 303 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 LPLP06858 475 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF888P0CJ79 500 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RPS2P15880 293 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 HTR2CP28335 458 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 OR10A3P58181 314 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TNFRSF17Q02223 184 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 PRDX1Q06830 199 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 EIF2B1Q14232 305 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CDONQ4KMG0 1287 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM25Q86YD3 366 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FNDC9Q8TBE3 224 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 MMABQ96EY8 250 aaPredicted RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 PHYHIPLQ96FC7 376 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SPIN2AQ99865 258 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SPIN2BQ9BPZ2 258 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZFYVE21Q9BQ24 234 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 BCL2L10Q9HD36 194 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 NIT2Q9NQR4 276 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLC7A11Q9UPY5 501 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SNRNP70P08621 437 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLC7A9P82251 487 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ALKBH1Q13686 389 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF852Q6ZMS4 543 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 OR51T1Q8NGJ9 327 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CRB3Q9BUF7 120 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 UBQLN3Q9H347 655 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLAMF7Q9NQ25 335 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 POMT2Q9UKY4 750 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 PEX11BO96011 259 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 IL5P05113 134 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CRHR2Q13324 411 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CYHR1Q6ZMK1 362 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 GDF7Q7Z4P5 450 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 OR2L13Q8N349 312 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 PXYLP1Q8TE99 480 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 B3GAT2Q9NPZ5 323 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 HRASLS2Q9NWW9 162 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 A0A087WUU8 490 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 TRBV5-4A0A0C4DH59 114 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 A6NIZ1 184 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 K7EPK0 472 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ADAMTS4O75173 837 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 EPXP11678 715 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 GJA1P17302 382 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RAP1BP61224 184 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 RAP1AP62834 184 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 IFITM3Q01628 133 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 CBFBQ13951 182 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 MFSD13AQ14CX5 517 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLC48A1Q6P1K1 146 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 FAM71E2Q8N5Q1 922 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 C2CD4CQ8TF44 421 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 HERVK_113Q902F9 699 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 OR52A5Q9H2C5 316 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 A0A1W2PS29 197 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ACOD1A6NK06 481 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 H3BUI4 141 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 KIR2DS3Q14952 304 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 GSG1Q2KHT4 349 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 C12orf73Q69YU5 71 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLC16A9Q7RTY1 509 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 GLCCI1Q86VQ1 547 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 OR8D4Q8NGM9 314 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 PCNPQ8WW12 178 aaKnown RBP4.44□□□□□ -1.7
CSMD3-203ENST00000343508 STACQ99469 402 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 SLC5A7Q9GZV3 580 aa4.44□□□□□ -1.7
CSMD3-203ENST00000343508 ISG20L2Q9H9L3 353 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms