RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 NTRK2Q16620 822 aa18.06■□□□□ 0.48
SEMA6C-201ENST00000341697 FOXRED1Q96CU9 486 aaPredicted RBP18.06■□□□□ 0.48
SEMA6C-201ENST00000341697 COG8Q96MW5 612 aa18.06■□□□□ 0.48
SEMA6C-201ENST00000341697 NGBQ9NPG2 151 aa18.06■□□□□ 0.48
SEMA6C-201ENST00000341697 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 UPK1AO00322 258 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 GPRIN2O60269 458 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 BEND4Q6ZU67 534 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 H1FNTQ75WM6 255 aaPredicted RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 RBM45Q8IUH3 476 aaKnown RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 ZNF454Q8N9F8 522 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 NDNFQ8TB73 568 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 GIMAP5Q96F15 307 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 MYEF2Q9P2K5 600 aaKnown RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 SLC1A3P43003 542 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 COX14Q96I36 57 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 COLQQ9Y215 455 aaPredicted RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 YARS2Q9Y2Z4 477 aaKnown RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 TMEM72A0PK05 275 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 OR2A25A4D2G3 310 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 ZNF701M0R085 212 aaPredicted RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 CSO75390 466 aaKnown RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 NOVA1P51513 510 aaKnown RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 ZNF582Q96NG8 517 aaPredicted RBP18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 ADAM18Q9Y3Q7 739 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 FAM57BQ71RH2 274 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 GRPEL2Q8TAA5 225 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 TAAR9Q96RI9 348 aa18.05■□□□□ 0.48
SEMA6C-201ENST00000341697 COL11A1P12107 1806 aaPredicted RBP18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 A0A0A6YYD5 115 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 H2AFB2P0C5Z0 115 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 OR8G3PP0DMU2 310 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 SIRPAP78324 504 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 TRA2AQ13595 282 aaKnown RBP eCLIP18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 OR2G6Q5TZ20 316 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 OR5H2Q8NGV7 314 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 UCN3Q969E3 161 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 CHST8Q9H2A9 424 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 V9GY05 133 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 PIP5K1CO60331 668 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 SERPINA5P05154 406 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 MAN2A2P49641 1150 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 PPP5CP53041 499 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 GUSBP11Q6P575 273 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 GDPD1Q8N9F7 314 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 MRPL15Q9P015 296 aaKnown RBP18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 CHRNA9Q9UGM1 479 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 ZNF281Q9Y2X9 895 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 PPM1DO15297 605 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 MMP11P24347 488 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 PUDPQ08623 228 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 SLC36A2Q495M3 483 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 ZFAND2BQ8WV99 257 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 CNRIP1Q96F85 164 aaPredicted RBP18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 NXF5Q9H1B4 397 aaKnown RBP18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 SYT4Q9H2B2 425 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 POLE4Q9NR33 117 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 DNAJB11Q9UBS4 358 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 FAM166BA8MTA8 275 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 ITGB2P05107 769 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 ARSBP15848 533 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 TRAPPC6BQ86SZ2 158 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 FBXL3Q9UKT7 428 aa18.04■□□□□ 0.48
SEMA6C-201ENST00000341697 DNAJB6O75190 326 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 PLCXD3Q63HM9 321 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 NKAIN4Q8IVV8 208 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 CITED4Q96RK1 184 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 CSF3RQ99062 836 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 UBQLN3Q9H347 655 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 WDR76Q9H967 626 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 SYNPO2LQ9H987 977 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 BCL2L10Q9HD36 194 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 ZNF175Q9Y473 711 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 TPOP07202 933 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 TEX19Q8NA77 164 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 LAT2Q9GZY6 243 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 KLF13Q9Y2Y9 288 aaPredicted RBP18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 CAPNS1P04632 268 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 DMWDQ09019 674 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 SPEM2Q0P670 501 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 AGAP7PQ5VUJ5 663 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 AGAP4Q96P64 663 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 CACNG6Q9BXT2 260 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 MAP1BP46821 2468 aaKnown RBP18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 FCMRO60667 390 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 PET100P0DJ07 73 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 EPHA8P29322 1005 aaPredicted RBP18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 KIR2DL1P43626 348 aaPredicted RBP18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 CEBPGP53567 150 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 ATP1B3P54709 279 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 GPNMBQ14956 572 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 SLX4IPQ5VYV7 408 aa18.03■□□□□ 0.48
SEMA6C-201ENST00000341697 ZNF587BE7ETH6 402 aa18.02■□□□□ 0.48
SEMA6C-201ENST00000341697 PAPLNO95428 1278 aa18.02■□□□□ 0.48
SEMA6C-201ENST00000341697 AMY2AP04746 511 aa18.02■□□□□ 0.48
SEMA6C-201ENST00000341697 ZNF26P17031 533 aaPredicted RBP18.02■□□□□ 0.48
SEMA6C-201ENST00000341697 SIGLEC14Q08ET2 396 aa18.02■□□□□ 0.48
SEMA6C-201ENST00000341697 SLC7A13Q8TCU3 470 aa18.02■□□□□ 0.48
SEMA6C-201ENST00000341697 PLEKHJ1Q9NW61 149 aa18.02■□□□□ 0.48
SEMA6C-201ENST00000341697 UCKL1Q9NWZ5 548 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 224.7 ms