RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 RAB3CQ96E17 227 aa11.63□□□□□ -0.55
DFFB-202ENST00000339350 CPNE2Q96FN4 548 aaPredicted RBP11.63□□□□□ -0.55
DFFB-202ENST00000339350 ZNF845Q96IR2 970 aaPredicted RBP11.63□□□□□ -0.55
DFFB-202ENST00000339350 C5orf34Q96MH7 638 aa11.63□□□□□ -0.55
DFFB-202ENST00000339350 MACROD1Q9BQ69 325 aa11.63□□□□□ -0.55
DFFB-202ENST00000339350 FUZQ9BT04 418 aa11.63□□□□□ -0.55
DFFB-202ENST00000339350 SLC46A2Q9BY10 475 aa11.63□□□□□ -0.55
DFFB-202ENST00000339350 PPIL1Q9Y3C6 166 aa11.63□□□□□ -0.55
DFFB-202ENST00000339350 SCN3AQ9NY46 2000 aa11.63□□□□□ -0.55
DFFB-202ENST00000339350 HEATR5BQ9P2D3 2071 aa11.63□□□□□ -0.55
DFFB-202ENST00000339350 TMEM72A0PK05 275 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 OR2M5A3KFT3 312 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 MBTPS2O43462 519 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 FARS2O95363 451 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 ELFN1P0C7U0 828 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 SDHAP31040 664 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 CD96P40200 585 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 POLR2LP62875 67 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 NTHL1P78549 312 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 DGCR2P98153 550 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 ZNHIT3Q15649 155 aaPredicted RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 SYT14P1Q58G82 188 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 SLC30A6Q6NXT4 461 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 UQCC3Q6UW78 93 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 SLITRK4Q8IW52 837 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 SLC39A11Q8N1S5 342 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 KLK6Q92876 244 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 CCDC74BQ96LY2 380 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 ZFP3Q96NJ6 502 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 OR1F2PQ96R84 312 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 SF3B6Q9Y3B4 125 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 PCYT1BQ9Y5K3 369 aaPredicted RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 F5P12259 2224 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 TCF20Q9UGU0 1960 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 DOCK9Q9BZ29 2069 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 PRAMEF27A3QJZ7 478 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 NARSO43776 548 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 MSX1P28360 303 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 OR2B8PP59922 312 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 PDE7AQ13946 482 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 OR8J1Q8NGP2 316 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 APOBEC4Q8WW27 367 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 CYSLTR2Q9NS75 346 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 CNIH4Q9P003 139 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 MTCL1Q9Y4B5 1905 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 COL4A6Q14031 1691 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 HIDE1A8MVS5 230 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 A8MXE2 369 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 HMGN4O00479 90 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 PLPP1O14494 284 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 GRM6O15303 877 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 SLC25A12O75746 678 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 MPGP29372 298 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 BUD31P41223 144 aaPredicted RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 RAG2P55895 527 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 SNTB2Q13425 540 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 C12orf73Q69YU5 71 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 PAPD4Q6PIY7 484 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 NPSR1Q6W5P4 371 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 SLC30A8Q8IWU4 369 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 OR4K5Q8NGD3 323 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 OR5M3Q8NGP4 307 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 ORAI1Q96D31 301 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 ZNF582Q96NG8 517 aaPredicted RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 MFFQ9GZY8 342 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 TREM1Q9NP99 234 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 MYNNQ9NPC7 610 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 FZD3Q9NPG1 666 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 KCND3Q9UK17 655 aa11.62□□□□□ -0.55
DFFB-202ENST00000339350 CARHSP1Q9Y2V2 147 aaKnown RBP11.62□□□□□ -0.55
DFFB-202ENST00000339350 CD8B2A6NJW9 211 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 ZNF705EA8MWA4 302 aaPredicted RBP11.61□□□□□ -0.55
DFFB-202ENST00000339350 ACTL6AO96019 429 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 SAGP10523 405 aaPredicted RBP11.61□□□□□ -0.55
DFFB-202ENST00000339350 CD8BP10966 210 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 HIST1H1BP16401 226 aaKnown RBP11.61□□□□□ -0.55
DFFB-202ENST00000339350 PAX6P26367 422 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 WDR5P61964 334 aaKnown RBP11.61□□□□□ -0.55
DFFB-202ENST00000339350 SNRPGP62308 76 aaKnown RBP11.61□□□□□ -0.55
DFFB-202ENST00000339350 MPPED2Q15777 294 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 NXPE4Q6UWF7 544 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 SPNS3Q6ZMD2 512 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 CACUL1Q86Y37 369 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 TRAM1L1Q8N609 369 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 VN1R2Q8NFZ6 395 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 OR5AR1Q8NGP9 310 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 ING5Q8WYH8 240 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 GINS4Q9BRT9 223 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 GPR55Q9Y2T6 319 aaPredicted RBP11.61□□□□□ -0.55
DFFB-202ENST00000339350 ANTXRLA6NF34 631 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 HSBP1L1C9JCN9 74 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 ARPC1BO15143 372 aaKnown RBP11.61□□□□□ -0.55
DFFB-202ENST00000339350 RAB36O95755 333 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 RCC1P18754 421 aaPredicted RBP11.61□□□□□ -0.55
DFFB-202ENST00000339350 PRLHRP49683 370 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 PNLIPRP2P54317 469 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 GMFBP60983 142 aa11.61□□□□□ -0.55
DFFB-202ENST00000339350 LSM6P62312 80 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms