RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 PPP4R1LQ9P1A2 415 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 ZNF229Q9UJW7 825 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 STUB1Q9UNE7 303 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 CORINQ9Y5Q5 1042 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 ALPK2Q86TB3 2170 aa20.32■□□□□ 0.84
PDLIM2-203ENST00000339162 HTR3EA5X5Y0 456 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 C9orf172C9J069 976 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 C11orf98E9PRG8 122 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 CD14P08571 375 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 OTX2P32243 289 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 TUBA1BP68363 451 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 PRAMEF20Q5VT98 475 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 ZNF322Q6U7Q0 402 aaPredicted RBP20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 LYPD4Q6UWN0 246 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 TUBA1AQ71U36 451 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 FAM122BQ7Z309 247 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 SUMF1Q8NBK3 374 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 TSSK2Q96PF2 358 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 DDOQ99489 341 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 FKRPQ9H9S5 495 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 KNTC1P50748 2209 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 NSG1A0A0A6YYJ2 146 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 H7C1C5 153 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 LCN6P62502 163 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 NTRK2Q16620 822 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 ANKDD1AQ495B1 522 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 C1orf140Q5VVS0 124 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 RFLNBQ8N5W9 214 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 CT55Q8WUE5 264 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 UFD1Q92890 307 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 FOXJ2Q9P0K8 574 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 ZNF346Q9UL40 294 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 TCFL5Q9UL49 500 aa20.31■□□□□ 0.84
PDLIM2-203ENST00000339162 A8MVM7 634 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 NPIPB7O75200 414 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 DKK1O94907 266 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 PLGP00747 810 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 CELP19835 753 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 NAA10P41227 235 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 MCFD2Q8NI22 146 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 RNF138Q8WVD3 245 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 TMEM234Q8WY98 164 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 C1GALT1C1Q96EU7 318 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 RPRD1BQ9NQG5 326 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 TAS2R5Q9NYW4 299 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 EP300Q09472 2414 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 AHCYP23526 432 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 CASP3P42574 277 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 E2F1Q01094 437 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 TPBGQ13641 420 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 EXT1Q16394 746 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 OR6K6Q8NGW6 343 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 OR52N1Q8NH53 320 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 TSPAN32Q96QS1 320 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 JAM3Q9BX67 310 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 PLGRKTQ9HBL7 147 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 GRHPRQ9UBQ7 328 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 WIF1Q9Y5W5 379 aa20.3■□□□□ 0.84
PDLIM2-203ENST00000339162 A0A1W2PQL4 384 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 MT-CO3P00414 261 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 SPI1P17947 270 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 IL11P20809 199 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 FOXF1Q12946 379 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 ARMC4Q5T2S8 1044 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 FAM69AQ5T7M9 428 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 CDCP2Q5VXM1 449 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 SSX6Q7RTT6 188 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 JAZF1Q86VZ6 243 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 ARL5BQ96KC2 179 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 ASPNQ9BXN1 380 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 CDCP1Q9H5V8 836 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 SSR3Q9UNL2 185 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 SF3B6Q9Y3B4 125 aaKnown RBP20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 AHCTF1Q8WYP5 2266 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 MAGEB4O15481 346 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 TFP02787 698 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 SDHAP31040 664 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 SLC6A19Q695T7 634 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 C22orf42Q6IC83 251 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 NDUFAF7Q7L592 441 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 BTLAQ7Z6A9 289 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 DRAXINQ8NBI3 349 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 TMED9Q9BVK6 235 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 CDADC1Q9BWV3 514 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 C6orf62Q9GZU0 229 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 HAO2Q9NYQ3 351 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 FBXL2Q9UKC9 423 aa20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 CAB39Q9Y376 341 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 CHCHD2Q9Y6H1 151 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-203ENST00000339162 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 IDH3BO43837 385 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 DLGAP3O95886 979 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 GRPRP30550 384 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 PYCR1P32322 319 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 FOXK1P85037 733 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 ZNF85Q03923 595 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 TMED1Q13445 227 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 GALEQ14376 348 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 PON3Q15166 354 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 ZNF829Q3KNS6 432 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms