RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 DDA1Q9BW61 102 aa18.42■□□□□ 0.54
RIPPLY3-201ENST00000329553 SPRY4Q9C004 299 aa18.42■□□□□ 0.54
RIPPLY3-201ENST00000329553 FGF20Q9NP95 211 aaPredicted RBP18.42■□□□□ 0.54
RIPPLY3-201ENST00000329553 PARD6AQ9NPB6 346 aa18.42■□□□□ 0.54
RIPPLY3-201ENST00000329553 NPAP1Q9NZP6 1156 aa18.42■□□□□ 0.54
RIPPLY3-201ENST00000329553 BAIAP2Q9UQB8 552 aa18.42■□□□□ 0.54
RIPPLY3-201ENST00000329553 B4DXG7 233 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 GP1BBP13224 206 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 TCN2P20062 427 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 HTR1FP30939 366 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 RPS18P62269 152 aaKnown RBP18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 LTBQ06643 244 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 C3orf38Q5JPI3 329 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 AGAP6Q5VW22 663 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 TMPRSS11AQ6ZMR5 421 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 SLC43A2Q8N370 569 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 OR11G2Q8NGC1 345 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 RNF138Q8WVD3 245 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 SLC25A46Q96AG3 418 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 NACC2Q96BF6 587 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 AGAP4Q96P64 663 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 TXNL4BQ9NX01 149 aaKnown RBP18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 MCIDASD6RGH6 385 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 PLD2O14939 933 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 CDC40O60508 579 aaKnown RBP eCLIP18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 CXCR1P25024 350 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 C17orf67Q0P5P2 114 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 ZNF79Q15937 498 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 LAX1Q8IWV1 398 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 OR8H2Q8N162 312 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 C10orf53Q8N6V4 93 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 SLC22A8Q8TCC7 542 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 ERMAPQ96PL5 475 aaPredicted RBP18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 MMP25Q9NPA2 562 aa18.41■□□□□ 0.54
RIPPLY3-201ENST00000329553 PRR33A8MZF0 331 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 IL1AP01583 271 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 FBXO45P0C2W1 286 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 NOS3P29474 1203 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 RPS4XP62701 263 aaKnown RBP18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 RUNX1T1Q06455 604 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 EXT1Q16394 746 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 TMEM53Q6P2H8 277 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 B3GLCTQ6Y288 498 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 OR10G3Q8NGC4 313 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 CT55Q8WUE5 264 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 LIPHQ8WWY8 451 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 NANSQ9NR45 359 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 CHRNA9Q9UGM1 479 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 KNTC1P50748 2209 aa18.4■□□□□ 0.54
RIPPLY3-201ENST00000329553 IRGMA1A4Y4 181 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 DKK1O94907 266 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 HK1P19367 917 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 TGM4P49221 684 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 CSRP2Q16527 193 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 ZMAT1Q5H9K5 638 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 OR4F15Q8NGB8 312 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 M1APQ8TC57 530 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 TAAR8Q969N4 342 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 SRRQ9GZT4 340 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 TAS2R10Q9NYW0 307 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 TCFL5Q9UL49 500 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 CMAHPQ9Y471 501 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 PCDHGA1Q9Y5H4 931 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 IER3IP1Q9Y5U9 82 aa18.39■□□□□ 0.54
RIPPLY3-201ENST00000329553 ZC3H12DA2A288 527 aaKnown RBP18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 RIIAD1A6NNX1 92 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 PRR23D1E9PI22 279 aaPredicted RBP18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 MASP2O00187 686 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 GSTT2P0CG29 244 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 GSTT2BP0CG30 244 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 PRR23D2P0DMB1 279 aaPredicted RBP18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 WNT4P56705 351 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 CRMP1Q14194 572 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 C1QL3Q5VWW1 255 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 NIPAL3Q6P499 406 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 MEPCEQ7L2J0 689 aaKnown RBP18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 NRARPQ7Z6K4 114 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 ADGRG3Q86Y34 549 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 CYB561A3Q8NBI2 242 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 SLC37A3Q8NCC5 494 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 MOSPD2Q8NHP6 518 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 MOV10Q9HCE1 1003 aaKnown RBP18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 MED11Q9P086 117 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 FOXJ2Q9P0K8 574 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 ADAM18Q9Y3Q7 739 aa18.39■□□□□ 0.53
RIPPLY3-201ENST00000329553 CCDC187A0A096LP49 1063 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 TMEM129A0AVI4 362 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 BLOC1S5-TXNDC5H3BN57 136 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 ITGA10O75578 1167 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 CDRT1O95170 752 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 CD63P08962 238 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 ASAH2BP0C7U1 165 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 RPL4P36578 427 aaKnown RBP18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 PTGDSP41222 190 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 RPS5P46782 204 aaKnown RBP18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 BAK1Q16611 211 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 NTRK2Q16620 822 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 ARHGAP11AQ6P4F7 1023 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 DPY19L2P2Q6ZN68 376 aa18.38■□□□□ 0.53
RIPPLY3-201ENST00000329553 NDUFAF7Q7L592 441 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms