RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 GDF7Q7Z4P5 450 aa13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 RBM45Q8IUH3 476 aaKnown RBP13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 GATAD2BQ8WXI9 593 aa13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 ST8SIA1Q92185 356 aa13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 CKAP5Q14008 2032 aa13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 PCM1Q15154 2024 aa13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 HPP00738 406 aa13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 AGFG1P52594 562 aaKnown RBP13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 TRILQ7L0X0 811 aa13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 TRAPPC6BQ86SZ2 158 aa13.2□□□□□ -0.3
SYNGR1-203ENST00000328933 IGHV3-15A0A0B4J1V0 119 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 TIMM8AO60220 97 aaPredicted RBP13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 HPRP00739 348 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 C6orf141Q5SZD1 244 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 CEACAM19Q7Z692 300 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 LAT2Q9GZY6 243 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 EGLN3Q9H6Z9 239 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 FAM118AQ9NWS6 357 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 PRAMEF27A3QJZ7 478 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 H3BNX3 289 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 ENTPD6O75354 484 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 CD14P08571 375 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 T-ENOLP0DO92 83 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 NPR2P20594 1047 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 TSPAN31Q12999 210 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 PGGHGQ32M88 737 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 TNFAIP8L3Q5GJ75 292 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 SLC22A25Q6T423 547 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 VASH1Q7L8A9 365 aaPredicted RBP13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 OR1J2Q8NGS2 313 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 ROBO4Q8WZ75 1007 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 GATBO75879 557 aaKnown RBP13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 SEC14L2O76054 403 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 IFNGR1P15260 489 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 GRK5P34947 590 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 CXCR4P61073 352 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 SPIN3Q5JUX0 258 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 OR5T2Q8NGG2 359 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 OR4C3Q8NH37 302 aa13.19□□□□□ -0.3
SYNGR1-203ENST00000328933 PTPRQQ9UMZ3 2332 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 FAM240BA0A1B0GVZ2 78 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 CDRT1O95170 752 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ZNF883P0CG24 379 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 DRD5P21918 477 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 SPHARQ15513 63 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 SLC35F2Q8IXU6 374 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 FAM181AQ8N9Y4 354 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ABHD5Q8WTS1 349 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 TMEM269A0A1B0GVZ9 245 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 AGAP5A6NIR3 686 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 CRYAAP02489 173 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ATP1B1P05026 303 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 FOXF1Q12946 379 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 FAM219BQ5XKK7 198 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 Q96M85 177 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 BARD1Q99728 777 aaKnown RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 PLAC1Q9HBJ0 212 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 COMMD9Q9P000 198 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 PCYT1BQ9Y5K3 369 aaPredicted RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 SHISA8B8ZZ34 492 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ZNF195O14628 629 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 SSNA1O43805 119 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 THBS1P07996 1170 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 FBXO45P0C2W1 286 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 CSF2RBP32927 897 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 GNG2P59768 71 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 MAD2L1BPQ15013 274 aaPredicted RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ZNF322Q6U7Q0 402 aaPredicted RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 TSPYL5Q86VY4 417 aaPredicted RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 DNAAF1Q8NEP3 725 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 PIGCQ92535 297 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 URM1Q9BTM9 101 aaKnown RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 LRRC42Q9Y546 428 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 SLCO1B1Q9Y6L6 691 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ARHGEF17Q96PE2 2063 aaPredicted RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 PRAMEF4O60810 478 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 EFEMP2O95967 443 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 MAS1P04201 325 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ARPC4P59998 168 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 PRAMEF9Q5VWM5 478 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 MBOAT2Q6ZWT7 520 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 DND1Q8IYX4 353 aaKnown RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 PPP1R35Q8TAP8 253 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 MRGPRX4Q96LA9 322 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 ZNF225Q9UK10 706 aa13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 MRPS18BQ9Y676 258 aaKnown RBP13.18□□□□□ -0.3
SYNGR1-203ENST00000328933 H0YAE9 185 aa13.17□□□□□ -0.3
SYNGR1-203ENST00000328933 H3BUI4 141 aa13.17□□□□□ -0.3
SYNGR1-203ENST00000328933 TNFSF11O14788 317 aa13.17□□□□□ -0.3
SYNGR1-203ENST00000328933 HOXA6P31267 233 aa13.17□□□□□ -0.3
SYNGR1-203ENST00000328933 ADH7P40394 386 aa13.17□□□□□ -0.3
SYNGR1-203ENST00000328933 EMP3P54852 163 aa13.17□□□□□ -0.3
SYNGR1-203ENST00000328933 RSU1Q15404 277 aa13.17□□□□□ -0.3
SYNGR1-203ENST00000328933 ABCA11PQ4W5N1 156 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms