RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 NSMAFQ92636 917 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 PGLYRP3Q96LB9 341 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 NRIP3Q9NQ35 241 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 NPFFR2Q9Y5X5 522 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 A0A0B4J2E0 115 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 A0A1B0GX12 115 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 TSPAN4O14817 238 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 SEC14L5O43304 696 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 PLRG1O43660 514 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 OR6A2O95222 327 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 SIX6O95475 246 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 HIST1H2ABP04908 130 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 OR2T7P0C7T2 308 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ST6GAL1P15907 406 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 HOXD11P31277 338 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 SQSTM1Q13501 440 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ZBTB37Q5TC79 503 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 DMKNQ6E0U4 476 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 HIST3H2AQ7L7L0 130 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 RCBTB1Q8NDN9 531 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 OR2T27Q8NH04 317 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC37A2Q8TED4 501 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 TNFAIP8L1Q8WVP5 186 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ADAMTS14Q8WXS8 1223 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 HIST1H2ACQ93077 130 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 NXPE2Q96DL1 559 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 LMF1Q96S06 567 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 SLX1AQ9BQ83 275 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 C1QTNF6Q9BXI9 259 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 PRTFDC1Q9NRG1 225 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ABRACLQ9P1F3 81 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 OR6C68A6NDL8 312 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 L7N2F9 121 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 EGFP01133 1207 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 PROS1P07225 676 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 UCHL1P09936 223 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 HNRNPA2B1P22626 353 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ALG11Q2TAA5 492 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 PRICKLE4Q2TBC4 344 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ESCO2Q56NI9 601 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC22A10Q63ZE4 541 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNF550Q7Z398 422 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNRF4Q8WWF5 429 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 AHCYL2Q96HN2 611 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 ALG12Q9BV10 488 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 FAM60AQ9NP50 221 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 LAMP5Q9UJQ1 280 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 COL4A3Q01955 1670 aa11.83□□□□□ -0.52
HMGCS1-201ENST00000325110 CLDN4O14493 209 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 PEX14O75381 377 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 GPANK1O95872 356 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 FAM157BP0CG42 384 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 SPI1P17947 270 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 DCTDP32321 178 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 HHEXQ03014 270 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 OR13H1Q8NG92 308 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 OR56B4Q8NH76 319 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 NKD1Q969G9 470 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 GLTPQ9NZD2 209 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 KLHL9Q9P2J3 617 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 V9GY05 133 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 LOC100509620A0A075B734 347 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 GALR3O60755 368 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 KCNJ13O60928 360 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 AK1P00568 194 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 AKT2P31751 481 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 PBX2P40425 430 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 PER3P56645 1201 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 EXOSC2Q13868 293 aaKnown RBP11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC36A2Q495M3 483 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 RPL22L1Q6P5R6 122 aaKnown RBP11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 TEX261Q6UWH6 196 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 SLC35D2Q76EJ3 337 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 CA13Q8N1Q1 262 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 LSM14AQ8ND56 463 aaKnown RBP11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 COQ8AQ8NI60 647 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 TIMP4Q99727 224 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 NOX3Q9HBY0 568 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 AKAP7Q9P0M2 348 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 UBQLN2Q9UHD9 624 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 U3KQ87 197 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 RTTNQ86VV8 2226 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 TCRBV21S2A2A0A5A6 115 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 PDCD5O14737 125 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 ARPC5O15511 151 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 CBX7O95931 251 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 RAF1P04049 648 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 ATP1B1P05026 303 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 PSMB1P20618 241 aaKnown RBP11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 RAD52P43351 418 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 SELENOPP49908 381 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 GPR143P51810 404 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 AP3S2P59780 193 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNF782Q6ZMW2 699 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 DPY19L4Q7Z388 723 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 ZNF784Q8NCA9 323 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 OR2T4Q8NH00 348 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 GHITMQ9H3K2 345 aa11.82□□□□□ -0.52
HMGCS1-201ENST00000325110 BAIAP2Q9UQB8 552 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms