RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 OR6C68A6NDL8 312 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 TSPAN19P0C672 248 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 ENTPD1P49961 510 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 MDGA2Q7Z553 956 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 ATCAYQ86WG3 371 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 NPEPL1Q8NDH3 523 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 POC1BQ8TC44 478 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 ASB15Q8WXK1 588 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 TM9SF4Q92544 642 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 OR51E2Q9H255 320 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 TAS2R5Q9NYW4 299 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 H2AFY2Q9P0M6 372 aaPredicted RBP16.66■□□□□ 0.26
USP39-201ENST00000323701 BAIAP2Q9UQB8 552 aa16.66■□□□□ 0.26
USP39-201ENST00000323701 EXOGQ9Y2C4 368 aaKnown RBP16.66■□□□□ 0.26
USP39-201ENST00000323701 hCG_2014768A0A024R1R8 64 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 IGLV3-32A0A0A0MS00 114 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 TEX13CA0A0J9YWL9 993 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 SNTNA6NMZ2 147 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 LRRTM2O43300 516 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 CD63P08962 238 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 ZNF3P17036 446 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 NBL1P41271 181 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 SSR4P51571 173 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 PRPS1P60891 318 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP39-201ENST00000323701 PLPPR5Q32ZL2 321 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 ALG10Q5BKT4 473 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 C1orf140Q5VVS0 124 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 ARMC10Q8N2F6 343 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 TMEM99Q8N816 258 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 FAM98AQ8NCA5 519 aaKnown RBP16.65■□□□□ 0.26
USP39-201ENST00000323701 ATP6V1C2Q8NEY4 427 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 PROKR2Q8NFJ6 384 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 OR2M3Q8NG83 312 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 GPX7Q96SL4 187 aaPredicted RBP16.65■□□□□ 0.26
USP39-201ENST00000323701 MND1Q9BWT6 205 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 SH2D2AQ9NP31 389 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 A8MVM7 634 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 RAD1O60671 282 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 NOL3O60936 208 aaKnown RBP16.65■□□□□ 0.26
USP39-201ENST00000323701 SLC25A12O75746 678 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 MRPL3P09001 348 aaKnown RBP16.65■□□□□ 0.26
USP39-201ENST00000323701 CDKN2AP42771 156 aaKnown RBP16.65■□□□□ 0.26
USP39-201ENST00000323701 SLC16A1P53985 500 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 CTXN1P60606 82 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 C19orf57Q0VDD7 668 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 ATP1A4Q13733 1029 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 ZNF485Q8NCK3 441 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 GATAD2BQ8WXI9 593 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 ST8SIA1Q92185 356 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 PSMF1Q92530 271 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 SECISBP2Q96T21 854 aaKnown RBP16.65■□□□□ 0.26
USP39-201ENST00000323701 TIMP4Q99727 224 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 FKRPQ9H9S5 495 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 ZNF229Q9UJW7 825 aa16.65■□□□□ 0.26
USP39-201ENST00000323701 ZNF346Q9UL40 294 aaKnown RBP16.65■□□□□ 0.26
USP39-201ENST00000323701 ARPC3O15145 178 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 LALBAP00709 142 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 HPP00738 406 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 IGHA1P01876 353 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 OPN1LWP04000 364 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 SUMO3P55854 103 aaPredicted RBP16.64■□□□□ 0.25
USP39-201ENST00000323701 RPS3AP61247 264 aaKnown RBP16.64■□□□□ 0.25
USP39-201ENST00000323701 RPS7P62081 194 aaKnown RBP16.64■□□□□ 0.25
USP39-201ENST00000323701 SLC6A19Q695T7 634 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 OPN5Q6U736 354 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 NANOGNBQ7Z5D8 188 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 GID4Q8IVV7 300 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 TMEM234Q8WY98 164 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 FRMD6Q96NE9 622 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 TBX5Q99593 518 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 MED13Q9UHV7 2174 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 AKAP13Q12802 2813 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 FTCDNL1E5RQL4 147 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 ETV2O00321 342 aaPredicted RBP16.64■□□□□ 0.25
USP39-201ENST00000323701 SCG5P05408 212 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 CD14P08571 375 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 TGIF1Q15583 401 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 FAM69AQ5T7M9 428 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 C19orf48Q6RUI8 117 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 LYPD4Q6UWN0 246 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 SLC43A2Q8N370 569 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 TMEM156Q8N614 296 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 TSSK2Q96PF2 358 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 TSPAN32Q96QS1 320 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 ASB6Q9NWX5 421 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 TNFRSF10DQ9UBN6 386 aa16.64■□□□□ 0.25
USP39-201ENST00000323701 FAM186AA6NE01 2351 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 HTR3EA5X5Y0 456 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 C11orf98E9PRG8 122 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 H7C1C5 153 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 TP53I11O14683 189 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 MYL12BO14950 172 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 MYL12AP19105 171 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 GRPRP30550 384 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 ATP6V1E1P36543 226 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 LIMK1P53667 647 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 DLX5P56178 289 aa16.63■□□□□ 0.25
USP39-201ENST00000323701 LCN6P62502 163 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms