RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 NFKBIDQ8NI38 313 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 DNAJA4Q8WW22 397 aaPredicted RBP15.59■□□□□ 0.09
TPM1-203ENST00000317516 SLC25A36Q96CQ1 311 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 ADAD1Q96M93 576 aaKnown RBP15.59■□□□□ 0.09
TPM1-203ENST00000317516 ZNF607Q96SK3 696 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 DHRS9Q9BPW9 319 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 C1QTNF6Q9BXI9 259 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 FKRPQ9H9S5 495 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 SELENONQ9NZV5 590 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 SLAMF8Q9P0V8 285 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.59■□□□□ 0.09
TPM1-203ENST00000317516 SLC13A4Q9UKG4 626 aa15.59■□□□□ 0.09
TPM1-203ENST00000317516 TMEM229AB2RXF0 380 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 CD8AP01732 235 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 PNMTP11086 282 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 GPX2P18283 190 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 TTKP33981 857 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 PPP2R2BQ00005 443 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 HOXC5Q00444 222 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 NRF1Q16656 503 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 PAGE3Q5JUK9 113 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 DHRS4L2Q6PKH6 230 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 NET1Q7Z628 596 aaPredicted RBP15.58■□□□□ 0.08
TPM1-203ENST00000317516 MSRB3Q8IXL7 192 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 LSMEM1Q8N8F7 131 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 STON2Q8WXE9 905 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 TMEM38AQ9H6F2 299 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 EVA1AQ9H8M9 152 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 OBP2BQ9NPH6 170 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 SLC52A3Q9NQ40 469 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 VAPAQ9P0L0 249 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 TRIM33Q9UPN9 1127 aa15.58■□□□□ 0.08
TPM1-203ENST00000317516 E7EQL1 145 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 ZNF587BE7ETH6 402 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 BMP4P12644 408 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 ZNF43P17038 809 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 CDH2P19022 906 aaPredicted RBP15.57■□□□□ 0.08
TPM1-203ENST00000317516 RPS5P46782 204 aaKnown RBP15.57■□□□□ 0.08
TPM1-203ENST00000317516 FABP6P51161 128 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 P2RY4P51582 365 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 NCALDP61601 193 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 SCARB2Q14108 478 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 ZNF544Q6NX49 715 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 ULK3Q6PHR2 472 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 C6orf89Q6UWU4 347 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 CKAP2Q8WWK9 683 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 BOD1Q96IK1 185 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 MAGEB18Q96M61 343 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 VIPAS39Q9H9C1 493 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 TMEM27Q9HBJ8 222 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 CBLN4Q9NTU7 201 aa15.57■□□□□ 0.08
TPM1-203ENST00000317516 LEF1Q9UJU2 399 aaPredicted RBP15.57■□□□□ 0.08
TPM1-203ENST00000317516 CADP27708 2225 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 ALG10BQ5I7T1 473 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 FAM69AQ5T7M9 428 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 FAM91A1Q658Y4 838 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 NIPAL3Q6P499 406 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 MUC15Q8N387 334 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 HIPK4Q8NE63 616 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 SLC38A4Q969I6 547 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 KTI12Q96EK9 354 aaPredicted RBP15.56■□□□□ 0.08
TPM1-203ENST00000317516 SLC47A1Q96FL8 570 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 OXGR1Q96P68 337 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 ZNF317Q96PQ6 595 aaPredicted RBP15.56■□□□□ 0.08
TPM1-203ENST00000317516 MOV10Q9HCE1 1003 aaKnown RBP15.56■□□□□ 0.08
TPM1-203ENST00000317516 B3GALT5Q9Y2C3 310 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 NDUFAF1Q9Y375 327 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 ATP23Q9Y6H3 246 aa15.56■□□□□ 0.08
TPM1-203ENST00000317516 VPS13CQ709C8 3753 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 HIVEP2P31629 2446 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 CSPG4Q6UVK1 2322 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 TRBV5-3A0A0A0MS03 114 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 A0A1B0GWA3 101 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 FTCDNL1E5RQL4 147 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 RNF223E7ERA6 249 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 AIM2O14862 343 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 IGHV4-39P01824 125 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 ACVR1BP36896 505 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 SELENOPP49908 381 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 UBE2NP61088 152 aaKnown RBP15.55■□□□□ 0.08
TPM1-203ENST00000317516 EGR4Q05215 589 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 CHRNB3Q05901 458 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 C1DQ13901 141 aaKnown RBP15.55■□□□□ 0.08
TPM1-203ENST00000317516 MFSD13AQ14CX5 517 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 RAB35Q15286 201 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 HMBOX1Q6NT76 420 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 EPHX4Q8IUS5 362 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 RNF217Q8TC41 542 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 EPYCQ99645 322 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 KCNS3Q9BQ31 491 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 SIKE1Q9BRV8 207 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 PTDSS2Q9BVG9 487 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 REG4Q9BYZ8 158 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 LINC00470Q9BZP3 86 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 TESQ9UGI8 421 aaKnown RBP15.55■□□□□ 0.08
TPM1-203ENST00000317516 RCE1Q9Y256 329 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 ANGPT4Q9Y264 503 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 ABCA2Q9BZC7 2435 aa15.55■□□□□ 0.08
TPM1-203ENST00000317516 TRAV36DV7A0A075B6V5 113 aa15.54■□□□□ 0.08
TPM1-203ENST00000317516 ANGPT2O15123 496 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms