RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 DRAM2Q6UX65 266 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 SIAH3Q8IW03 269 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 BAP18Q8IXM2 172 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ZDHHC22Q8N966 263 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF563Q8TA94 476 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 SPRYD4Q8WW59 207 aaPredicted RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CLEC4DQ8WXI8 215 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ST8SIA2Q92186 375 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 MIB2Q96AX9 1013 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 EXOSC8Q96B26 276 aaKnown RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 UPRTQ96BW1 309 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 GMPPAQ96IJ6 420 aaPredicted RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CXorf58Q96LI9 332 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 EBPLQ9BY08 206 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 RYDENQ9NUL5 291 aaKnown RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 SH3BGRL2Q9UJC5 107 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 TNS1Q9HBL0 1735 aaKnown RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 C13orf42A0A1B0GVH6 325 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 APBB3O95704 486 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 PTBP3O95758 552 aaKnown RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 PRR35P0CG20 571 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 PRKACGP22612 351 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CPT2P23786 658 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CRABP1P29762 137 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 UBE2KP61086 200 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 IKZF1Q13422 519 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 GPR157Q5UAW9 335 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ALG1LQ6GMV1 187 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 LINC00518Q8N0U6 118 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ARFGAP1Q8N6T3 406 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF610Q8N9Z0 462 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 OR5M9Q8NGP3 310 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 KCNG3Q8TAE7 436 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CD200R1Q8TD46 325 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 F2RL3Q96RI0 385 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF586Q9NXT0 402 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 GNG13Q9P2W3 67 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 HS3ST4Q9Y661 456 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 RELNP78509 3460 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 IGKV6D-21A0A0A0MT36 114 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 NRP1O14786 923 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 MED6O75586 246 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CTSLP07711 333 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CD3GP09693 182 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 NAGAP17050 411 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 FKBP2P26885 142 aaKnown RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 HOXA9P31269 272 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ACTR1BP42025 376 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CSNK1EP49674 416 aaKnown RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 LUMP51884 338 aaPredicted RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 HMGCS1Q01581 520 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 AQP6Q13520 282 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 IL10RAQ13651 578 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 SF1Q15637 639 aaKnown RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ACSM3Q53FZ2 586 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 EEF1DP3Q658K8 133 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 UNQ6126/PRO20091Q6UXV3 157 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 RNF44Q7L0R7 432 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 LRRC25Q8N386 305 aaPredicted RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 PRSS35Q8N3Z0 413 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 OR9K2Q8NGE7 335 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 OR2L8Q8NGY9 312 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 GOT1L1Q8NHS2 421 aaPredicted RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 TANKQ92844 425 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ECHDC3Q96DC8 303 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ADAD1Q96M93 576 aaKnown RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 MCHR1Q99705 422 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 TIMM29Q9BSF4 260 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 CRB3Q9BUF7 120 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 GIMAP2Q9UG22 337 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF337Q9Y3M9 751 aa4.21□□□□□ -1.74
CNOT1-201ENST00000317147 DNMT3AQ9Y6K1 912 aaPredicted RBP4.21□□□□□ -1.74
CNOT1-201ENST00000317147 LOC100289279A0A1B0GTE1 492 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 RPS10-NUDT3A0A1W2PQS6 291 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 CSO75390 466 aaKnown RBP4.2□□□□□ -1.74
CNOT1-201ENST00000317147 NUDT14O95848 222 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 LMO2P25791 158 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 PIGAP37287 484 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 RPS10P46783 165 aaKnown RBP4.2□□□□□ -1.74
CNOT1-201ENST00000317147 ZNF239Q16600 458 aaKnown RBP4.2□□□□□ -1.74
CNOT1-201ENST00000317147 ALG10BQ5I7T1 473 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 CLEC12AQ5QGZ9 265 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 GPC2Q8N158 579 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 TMEM190Q8WZ59 177 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 SLC41A2Q96JW4 573 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 GAS2L1Q99501 681 aaPredicted RBP4.2□□□□□ -1.74
CNOT1-201ENST00000317147 CHRDL1Q9BU40 450 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 CTDSP1Q9GZU7 261 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 TREM2Q9NZC2 230 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 SCDO00767 359 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 CLEC3AO75596 197 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 ERAL1O75616 437 aaKnown RBP4.2□□□□□ -1.74
CNOT1-201ENST00000317147 OR2C1O95371 312 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 THBS1P07996 1170 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 DAOP14920 347 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 AMD1P17707 334 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 RPL23AP62750 156 aaKnown RBP4.2□□□□□ -1.74
CNOT1-201ENST00000317147 SIRPAP78324 504 aa4.2□□□□□ -1.74
CNOT1-201ENST00000317147 HSF5Q4G112 596 aaPredicted RBP4.2□□□□□ -1.74
CNOT1-201ENST00000317147 PKDCCQ504Y2 493 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms