RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TCRBV16S1A1N1A0A5B0 115 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 GLTPD2A6NH11 291 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 LGALS8O00214 317 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 LILRB5O75023 590 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 AIFM1O95831 613 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 TBX6O95947 436 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 FCER2P06734 321 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 F3P13726 295 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 GTF2F2P13984 249 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CSF2RAP15509 400 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PAX6P26367 422 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CFPP27918 469 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 DCDP81605 110 aaKnown RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 OR1Q1Q15612 314 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 HMGN3Q15651 99 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 DRAM2Q6UX65 266 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 OR2W3Q7Z3T1 314 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 TMPRSS12Q86WS5 348 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 BAP18Q8IXM2 172 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 DND1Q8IYX4 353 aaKnown RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 MUC20Q8N307 709 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 OR2L13Q8N349 312 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 KDF1Q8NAX2 398 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 SNIP1Q8TAD8 396 aaKnown RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 IRF7Q92985 503 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 GAL3ST3Q96A11 431 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 MS4A6EQ96DS6 147 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 SAT2Q96F10 170 aaPredicted RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CNTNAP3BQ96NU0 1288 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PCDHB10Q9UN67 800 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 ERVK-19Q9WJR5 959 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 EVPLQ92817 2033 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 LRIT2A6NDA9 550 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 RAB3DO95716 219 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 LRG1P02750 347 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 MRPL3P09001 348 aaKnown RBP4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CERS1P27544 350 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 MC3RP41968 323 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PRPS1P60891 318 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 SMCO1Q147U7 214 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 UBE3DQ7Z6J8 389 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM150AQ86TG1 271 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 GLYATL2Q8WU03 294 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 CDS1Q92903 461 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 RAB7BQ96AH8 199 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF558Q96NG5 402 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 PRSS27Q9BQR3 290 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 COA4Q9NYJ1 87 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 ICAM5Q9UMF0 924 aa4.4□□□□□ -1.71
PTPN13-201ENST00000316707 SCGNO76038 276 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SIX6O95475 246 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 EFEMP2O95967 443 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 DDX6P26196 483 aaKnown RBP eCLIP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 FNTBP49356 437 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 RPS11P62280 158 aaKnown RBP eCLIP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 POLR2GP62487 172 aaKnown RBP eCLIP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 RASGEF1BQ0VAM2 473 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CRHR2Q13324 411 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 LTB4RQ15722 352 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 H3F3CQ6NXT2 135 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 MTFR2Q6P444 385 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 RPTNQ6XPR3 784 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 DPY19L2P2Q6ZN68 376 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SLC36A1Q7Z2H8 476 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF550Q7Z398 422 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PUSL1Q8N0Z8 303 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 OR4K14Q8NGD5 310 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 OR4C16Q8NGL9 310 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 OR5AR1Q8NGP9 310 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SFT2D1Q8WV19 159 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 KLK6Q92876 244 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 VOPP1Q96AW1 172 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SLC35A4Q96G79 324 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 STACQ99469 402 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 EDEM2Q9BV94 578 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SEC11CQ9BY50 192 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SMCO4Q9NRQ5 59 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CLDND1Q9NY35 253 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 IL36AQ9UHA7 158 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 GPR55Q9Y2T6 319 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 A0A1W2PR48 441 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 TO15178 435 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 FGF16O43320 207 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 GATCO43716 136 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF254O75437 659 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SYN1P17600 705 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CDK2P24941 298 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CD34P28906 385 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 DLSTP36957 453 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 H2BFSP57053 126 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 TAS2R31P59538 309 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SSTP61278 116 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PPIAP62937 165 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CXADRP78310 365 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 OC90Q02509 493 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 STEAP1BQ6NZ63 245 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 STAC2Q6ZMT1 411 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF676Q8N7Q3 588 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SLC16A11Q8NCK7 471 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 STOML3Q8TAV4 291 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms