RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OR6C1Q96RD1 312 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 KCNS3Q9BQ31 491 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ZPBPQ9BS86 351 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TSSK6Q9BXA6 273 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TEX12Q9BXU0 123 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ULBP3Q9BZM4 244 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 PCBD2Q9H0N5 130 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF768Q9H5H4 540 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 RNF167Q9H6Y7 350 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CXorf36Q9H7Y0 433 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 RNF121Q9H920 327 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 EXOSC4Q9NPD3 245 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 WASH6PQ9NQA3 447 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 MIEF1Q9NQG6 463 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 DDX28Q9NUL7 540 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 MED17Q9NVC6 651 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ASB6Q9NWX5 421 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 TXNL4BQ9NX01 149 aaKnown RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 LUZP4Q9P127 313 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SEMA5BQ9P283 1151 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 ERRFI1Q9UJM3 462 aaPredicted RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 POLHQ9Y253 713 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SLC9A8Q9Y2E8 581 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 KLHL20Q9Y2M5 609 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CAB39Q9Y376 341 aaPredicted RBP4.48□□□□□ -1.69
CKS1B-201ENST00000308987 NOX1Q9Y5S8 564 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 SNX8Q9Y5X2 465 aa4.48□□□□□ -1.69
CKS1B-201ENST00000308987 CPAMD8Q8IZJ3 1885 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 A0A0G2JPF8 293 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TRBV4-1A0A0J9YWV2 114 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 FABP12A6NFH5 140 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 OR2AG2A6NM03 316 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 OR52A4PA6NMU1 304 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 KDM4EB2RXH2 506 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 HNRNPCL2B2RXH8 293 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 B4DXG7 233 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 HNRNPCL3B7ZW38 293 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MKRN2OSH3BPM6 223 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 J3KTA2 159 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 SGK494L7N484 410 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 HMGN4O00479 90 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 KLF4O43474 513 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 CHST10O43529 356 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 PRKYO43930 277 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 OR10H3O60404 316 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 SLC19A2O60779 497 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 GUCY1B2O75343 617 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 SLC43A1O75387 559 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 NME6O75414 186 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 CEACAM4O75871 244 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 UBXN7O94888 489 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 CDRT1O95170 752 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 C1QBP02746 253 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 HLA-DPB1P04440 258 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RPN2P04844 631 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 KLK1P06870 262 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ADRA2AP08913 450 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 CSF3P09919 207 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TSPAN19P0C672 248 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 HNRNPCL4P0DMR1 293 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ERGP11308 486 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 FOLR1P15328 257 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 HK1P19367 917 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TNFRSF1BP20333 461 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 POU1F1P28069 291 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ACADLP28330 430 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 PPP2R1BP30154 601 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 IFNA8P32881 189 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RCVRNP35243 200 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 SOAT1P35610 550 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 BSGP35613 385 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 BDKRB1P46663 353 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 GZMKP49863 264 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 CLCNKAP51800 687 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 CTSCP53634 463 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 GAS1P54826 345 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MANFP55145 182 aaKnown RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 BTG1P62324 171 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MC1RQ01726 317 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TNK1Q13470 666 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 QPRTQ15274 297 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 INPP5JQ15735 1006 aaPredicted RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 BAK1Q16611 211 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 MINDY4Q4G0A6 757 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 HSD17B12Q53GQ0 312 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 TM4SF20Q53R12 229 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 SYT14P1Q58G82 188 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 PRAMEF17Q5VTA0 474 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 C1QL3Q5VWW1 255 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 KHDRBS2Q5VWX1 349 aaKnown RBP4.47□□□□□ -1.69
CKS1B-201ENST00000308987 NXNL2Q5VZ03 156 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 BHLHB9Q6PI77 547 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 FAM131AQ6UXB0 335 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RASSF6Q6ZTQ3 369 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 ZNF767PQ75MW2 155 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 RHOUQ7L0Q8 258 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 C6orf120Q7Z4R8 191 aa4.47□□□□□ -1.69
CKS1B-201ENST00000308987 C11orf96Q7Z7L8 435 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms