RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 GNGT2O14610 69 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 ZG16O60844 167 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 IFI30P13284 250 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 TMEM225Q6GV28 225 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 ABLIM2Q6H8Q1 611 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 CCDC71Q8IV32 467 aaPredicted RBP21.84■■□□□ 1.09
HOXC9-201ENST00000303450 CDK20Q8IZL9 346 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 ZNF417Q8TAU3 575 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 BPIFA2Q96DR5 249 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 GMPPAQ96IJ6 420 aaPredicted RBP21.84■■□□□ 1.09
HOXC9-201ENST00000303450 ZNF587Q96SQ5 575 aaPredicted RBP21.84■■□□□ 1.09
HOXC9-201ENST00000303450 DENND2DQ9H6A0 471 aaPredicted RBP21.84■■□□□ 1.09
HOXC9-201ENST00000303450 REEP1Q9H902 201 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 FKRPQ9H9S5 495 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 CHST11Q9NPF2 352 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 KLHL13Q9P2N7 655 aa21.84■■□□□ 1.09
HOXC9-201ENST00000303450 FLNCQ14315 2725 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 FZD7O75084 574 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 HIST1H2ABP04908 130 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 CTSSP25774 331 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 FOXF2Q12947 444 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 H1FNTQ75WM6 255 aaPredicted RBP21.83■■□□□ 1.09
HOXC9-201ENST00000303450 HIST3H2AQ7L7L0 130 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 HIST1H2ACQ93077 130 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 SDCCAG3Q96C92 435 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 DUS3LQ96G46 650 aaKnown RBP21.83■■□□□ 1.09
HOXC9-201ENST00000303450 KRCC1Q9NPI7 259 aaPredicted RBP21.83■■□□□ 1.09
HOXC9-201ENST00000303450 SEC14L4Q9UDX3 406 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 ZNF229Q9UJW7 825 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 B3GALT5Q9Y2C3 310 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 AP4S1Q9Y587 144 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 LYVE1Q9Y5Y7 322 aa21.83■■□□□ 1.09
HOXC9-201ENST00000303450 INTS1Q8N201 2190 aaKnown RBP21.82■■□□□ 1.08
HOXC9-201ENST00000303450 HELZ2Q9BYK8 2649 aaKnown RBP21.82■■□□□ 1.08
HOXC9-201ENST00000303450 SH3PXD2BA1X283 911 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 ANKRD65E5RJM6 399 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 RAMP1O60894 148 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 OR7A10O76100 309 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 CRHP06850 196 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 HMGA2P52926 109 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 CTBP2P56545 445 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 PRKCDQ05655 676 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 PMS2P3Q13401 168 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 SEC23BQ15437 767 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 EXOC3L2Q2M3D2 409 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 GPAT4Q86UL3 456 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 C10orf67Q8IYJ2 551 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 FAM26EQ8N5C1 309 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 CNEP1R1Q8N9A8 125 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 SCAIQ8N9R8 606 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 OR4K5Q8NGD3 323 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 PSD2Q9BQI7 771 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 FUZQ9BT04 418 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 GP6Q9HCN6 339 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 ARMC1Q9NVT9 282 aa21.82■■□□□ 1.08
HOXC9-201ENST00000303450 MRPL39Q9NYK5 338 aaKnown RBP21.82■■□□□ 1.08
HOXC9-201ENST00000303450 SAMHD1Q9Y3Z3 626 aaKnown RBP21.82■■□□□ 1.08
HOXC9-201ENST00000303450 NCOA6Q14686 2063 aaPredicted RBP21.82■■□□□ 1.08
HOXC9-201ENST00000303450 TIPRLO75663 272 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 VAMP5O95183 116 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 FUT1P19526 365 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 CHRNB4P30926 498 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 TMEM201Q5SNT2 666 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 FAM214BQ7L5A3 538 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 SLC46A3Q7Z3Q1 461 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 MRGPRGQ86SM5 289 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 TUSC5Q8IXB3 177 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 LRRC17Q8N6Y2 441 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 OR5J2Q8NH18 312 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 ASB5Q8WWX0 329 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 SFXN3Q9BWM7 321 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 ZNF629Q9UEG4 869 aaPredicted RBP21.81■■□□□ 1.08
HOXC9-201ENST00000303450 RASD1Q9Y272 281 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 TMEM5Q9Y2B1 443 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 EMC9Q9Y3B6 208 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 U3KQV3 271 aa21.81■■□□□ 1.08
HOXC9-201ENST00000303450 A0A1W2PNV4 684 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 SS18L1O75177 396 aaPredicted RBP21.8■■□□□ 1.08
HOXC9-201ENST00000303450 LDLRP01130 860 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 YES1P07947 543 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 SAGP10523 405 aaPredicted RBP21.8■■□□□ 1.08
HOXC9-201ENST00000303450 OPRM1P35372 400 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 LIMS1P48059 325 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 P2RY4P51582 365 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 SIRPAP78324 504 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 IL1RL1Q01638 556 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 PPP1R8Q12972 351 aaKnown RBP21.8■■□□□ 1.08
HOXC9-201ENST00000303450 PDK3Q15120 406 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 EEF1A1P5Q5VTE0 462 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 ADPRHL1Q8NDY3 354 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 TACO1Q9BSH4 297 aaKnown RBP21.8■■□□□ 1.08
HOXC9-201ENST00000303450 SF3B5Q9BWJ5 86 aaKnown RBP21.8■■□□□ 1.08
HOXC9-201ENST00000303450 BCO1Q9HAY6 547 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 EMC3Q9P0I2 261 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 ZNF716A6NP11 495 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 DVL2O14641 736 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 HNRNPRO43390 633 aaKnown RBP21.8■■□□□ 1.08
HOXC9-201ENST00000303450 OR10H3O60404 316 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 OR6A2O95222 327 aa21.8■■□□□ 1.08
HOXC9-201ENST00000303450 ASAH2BP0C7U1 165 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms