RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ABHD16AO95870 558 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 CD14P08571 375 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZGLP1P0C6A0 271 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 DPY19L2P2Q6ZN68 376 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 TP53I13Q8NBR0 393 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 IL17RDQ8NFM7 739 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 ALG12Q9BV10 488 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 CHST8Q9H2A9 424 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 KNTC1P50748 2209 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 IGHV1OR15-9A0A0B4J2B8 117 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 TIMM8AO60220 97 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 H1FNTQ75WM6 255 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 TUBB1Q9H4B7 451 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 RLIMQ9NVW2 624 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 BORCS7-ASMTA0A0B4J1R7 106 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 SURF4O15260 269 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 TMPRSS11DO60235 418 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 GPRIN2O60269 458 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 MT-CO3P00414 261 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 AMY2AP04746 511 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 MFAP5Q13361 173 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 MRPL41Q8IXM3 137 aaKnown RBP16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 MRGPRX3Q96LB0 322 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 GABRG3Q99928 467 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 GPR85P60893 370 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 PRR18Q8N4B5 295 aa16.35■□□□□ 0.21
CDC42EP3-201ENST00000295324 TMEM92Q6UXU6 159 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 GDF7Q7Z4P5 450 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 TSLPQ969D9 159 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 PPIL1Q9Y3C6 166 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 C2orf72A6NCS6 295 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 TRIM64CA6NLI5 447 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 CDK1P06493 297 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF836Q6ZNA1 936 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 CNOT9Q92600 299 aaKnown RBP16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 MYO10Q9HD67 2058 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 HMX2A2RU54 273 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 GASTP01350 101 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 IL2RAP01589 272 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 ARSBP15848 533 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 LEXMQ3ZCV2 418 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 FBXL6Q8N531 539 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 OR6T1Q8NGN1 323 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 CCDC86Q9H6F5 360 aaKnown RBP16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 SERGEFQ9UGK8 458 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 NRG2O14511 850 aaPredicted RBP16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 NID1P14543 1247 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 PRKACBP22694 351 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 COL28A1Q2UY09 1125 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 RPL22L1Q6P5R6 122 aaKnown RBP16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 TMEM150AQ86TG1 271 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 SP7Q8TDD2 431 aaPredicted RBP16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 PAQR5Q9NXK6 330 aaPredicted RBP16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 LCN1P31025 176 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 METAP1P53582 386 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 GABREP78334 506 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF687Q8N1G0 1237 aa16.34■□□□□ 0.21
CDC42EP3-201ENST00000295324 B4DXG7 233 aa16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 EFNA3P52797 238 aa16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 NCS1P62166 190 aa16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 ATXN7L3Q14CW9 347 aaPredicted RBP16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF181Q2M3W8 571 aa16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZNF684Q5T5D7 378 aa16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 DHRS13Q6UX07 377 aa16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 ZBTB8BQ8NAP8 495 aaPredicted RBP16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 CHPT1Q8WUD6 406 aa16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 TFAP2CQ92754 450 aa16.33■□□□□ 0.21
CDC42EP3-201ENST00000295324 H2AFB2P0C5Z0 115 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 ERVK-16P61578 105 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 S100A12P80511 92 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 NTRK2Q16620 822 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 ARHGAP11BQ3KRB8 267 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 SLC22A6Q4U2R8 563 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 RTL6Q6ICC9 239 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 YRDCQ86U90 279 aaKnown RBP16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 SMRP1Q8NCR6 262 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 STEAP2Q8NFT2 490 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 SDF2Q99470 211 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 MYEF2Q9P2K5 600 aaKnown RBP16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 CHRNA9Q9UGM1 479 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 RHBDD3Q9Y3P4 386 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 KLK10O43240 276 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 KLK8O60259 260 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 IFNA5P01569 189 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 GABRA2P47869 451 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 BTG2P78543 158 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 GPR176Q14439 515 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 KCNE4Q8WWG9 221 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 FIGNL2A6NMB9 653 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 THBS1P07996 1170 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 ZNF91Q05481 1191 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 PPA1Q15181 289 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 PELI3Q8N2H9 469 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 PHOX2BQ99453 314 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 DEFB127Q9H1M4 99 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 V9GY05 133 aa16.33■□□□□ 0.2
CDC42EP3-201ENST00000295324 H7C1C5 153 aa16.32■□□□□ 0.2
CDC42EP3-201ENST00000295324 PEX11BO96011 259 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms