RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CLLU1Q5K131 121 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 FAM69AQ5T7M9 428 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 GPR139Q6DWJ6 353 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 GPR137Q96N19 417 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 ARHGDIGQ99819 225 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 ARPC5LQ9BPX5 153 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 SCML1Q9UN30 329 aa12.35□□□□□ -0.43
SCAF4-201ENST00000286835 EXOGQ9Y2C4 368 aaKnown RBP12.35□□□□□ -0.43
SCAF4-201ENST00000286835 MEIKINA0A087WXM9 373 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 PAPLNO95428 1278 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 PRSS42Q7Z5A4 293 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 OR5M1Q8NGP8 315 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 RBP7Q96R05 134 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 MICU1Q9BPX6 476 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 SLC6A17Q9H1V8 727 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 TRPV4Q9HBA0 871 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 RXFP3Q9NSD7 469 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 LINC01565O15544 149 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 IGHA1P01876 353 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 F13BP05160 661 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 TACSTD2P09758 323 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 APEHP13798 732 aaKnown RBP12.34□□□□□ -0.43
SCAF4-201ENST00000286835 POU3F2P20265 443 aaPredicted RBP12.34□□□□□ -0.43
SCAF4-201ENST00000286835 NKPD1Q17RQ9 610 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 OLFML2AQ68BL7 652 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 TMEM65Q6PI78 240 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF227Q86WZ6 799 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 JAGN1Q8N5M9 183 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 FAM3CQ92520 227 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 MRPL38Q96DV4 380 aaKnown RBP12.34□□□□□ -0.43
SCAF4-201ENST00000286835 SLC39A1Q9NY26 324 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 CD207Q9UJ71 328 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 F5H5P2 479 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 PRAF2O60831 178 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 LILRB5O75023 590 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 HLA-DQB1P01920 261 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 CCKBRP32239 447 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 DHPSP49366 369 aaPredicted RBP12.34□□□□□ -0.43
SCAF4-201ENST00000286835 KCNAB1Q14722 419 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 FAM74A1Q5RGS3 127 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 FAM122CQ6P4D5 195 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 KCTD9Q7L273 389 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 NDUFAF7Q7L592 441 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 COMMD2Q86X83 199 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 OR5AK2Q8NH90 309 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 TRAF4Q9BUZ4 470 aaPredicted RBP12.34□□□□□ -0.43
SCAF4-201ENST00000286835 SLC6A20Q9NP91 592 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 ZNF346Q9UL40 294 aaKnown RBP12.34□□□□□ -0.43
SCAF4-201ENST00000286835 SCN8AQ9UQD0 1980 aa12.34□□□□□ -0.43
SCAF4-201ENST00000286835 KANTRA0A1W2PQU2 76 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.43
SCAF4-201ENST00000286835 CFIP05156 583 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 ZGLP1P0C6A0 271 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 FOSL2P15408 326 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 C5AR1P21730 350 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 CDK2P24941 298 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 S100A11P31949 105 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 MMP15P51511 669 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 AKR1C2P52895 323 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 AKR1C1Q04828 323 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 POU4F2Q12837 409 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 GK2Q14410 553 aaPredicted RBP12.33□□□□□ -0.43
SCAF4-201ENST00000286835 PRAMEF17Q5VTA0 474 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 BEST3Q8N1M1 668 aa12.33□□□□□ -0.43
SCAF4-201ENST00000286835 C7orf50Q9BRJ6 194 aaKnown RBP12.33□□□□□ -0.43
SCAF4-201ENST00000286835 MRPS18AQ9NVS2 196 aaKnown RBP12.33□□□□□ -0.43
SCAF4-201ENST00000286835 C13orf42A0A1B0GVH6 325 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 LINC00862A6NCI5 91 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 ACOT7O00154 380 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 MAP3K8P41279 467 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 RAP2BP61225 183 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 ADAM8P78325 824 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 LILRA6Q6PI73 481 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 BAIAP2L2Q6UXY1 529 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 ABHD13Q7L211 337 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 PHOSPHO1Q8TCT1 267 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 SMIM4Q8WVI0 70 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 PELI1Q96FA3 418 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 SEC22AQ96IW7 307 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 ANKRD19PQ9H560 264 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 INPP5EQ9NRR6 644 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 POMT2Q9UKY4 750 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 OR2AT4A6NND4 320 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 RHPN2P1A8MT19 583 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 C4orf51C9J302 202 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 PLPP2O43688 288 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 PLGP00747 810 aaPredicted RBP12.33□□□□□ -0.44
SCAF4-201ENST00000286835 DLX5P56178 289 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 ZNF77Q15935 545 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 GSG1LQ6UXU4 331 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 LIX1LQ8IVB5 337 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 LNX2Q8N448 690 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 HSD17B8Q92506 261 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 SORCS2Q96PQ0 1159 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.33□□□□□ -0.44
SCAF4-201ENST00000286835 PLXND1Q9Y4D7 1925 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 EP300Q09472 2414 aaPredicted RBP12.33□□□□□ -0.44
SCAF4-201ENST00000286835 KHNYNO15037 678 aaKnown RBP12.33□□□□□ -0.44
SCAF4-201ENST00000286835 SHOXO15266 292 aa12.33□□□□□ -0.44
SCAF4-201ENST00000286835 GAS1P54826 345 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms